Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a01
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.4  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   5.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   7.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.8  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/62 (22%), Positives = 25/62 (40%)
 Frame = -2

Query: 306 EGIMPYLSNWTSKFNLVIVDGRFQCSTGRSLLNLFWAHNLLDGYLLKGLGSVGDEGLFKN 127
           E +  Y+     KF+ V  DG F     R +  +F   N ++  L+    ++ D  +   
Sbjct: 57  ENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEIN-QLITECSAISDTNVHLK 115

Query: 126 TT 121
            T
Sbjct: 116 IT 117


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 141 PHHLQNPIPSKDNRPTGYGPRTNLKV 218
           PHHL   +P+ D+  +   P   L +
Sbjct: 11  PHHLSPNMPTMDSTVSSAKPEPELNI 36


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/47 (23%), Positives = 20/47 (42%)
 Frame = -2

Query: 306 EGIMPYLSNWTSKFNLVIVDGRFQCSTGRSLLNLFWAHNLLDGYLLK 166
           E +  Y+     KFN+V  +G F     R ++      N  D  +++
Sbjct: 57  ENVQSYVECMMKKFNVVDENGNFNEKNTRDIVQAVLDDNETDQLIVE 103


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 319 IWLG*GYHAVSV*LDVEIQPCNSRRSV 239
           +WL  G    S  +DVE  P + +R V
Sbjct: 120 VWLSHGIFRSSCDIDVEFFPFDEQRCV 146


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 458 NDLLPIYNILE 426
           NDLL  YN+LE
Sbjct: 29  NDLLDTYNVLE 39


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 514 TDGHWASRWGSTSVISVT 461
           T  +  +RW +TSVI+ T
Sbjct: 773 TSNYSTTRWPATSVITTT 790


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,210
Number of Sequences: 438
Number of extensions: 5194
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)