Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29p14
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.7  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   3.9  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   3.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.1  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +1

Query: 82  FTCLQTKMVKEKPNSIRIYDDEGFRRRAACICVRSDA 192
           F   + K  K  PN +  YD    R+    IC   DA
Sbjct: 199 FFLAEFKSAKTPPNKLNCYDLRRVRKNYNSICELVDA 235


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +1

Query: 316 GVIGKLGRCLGVFENREHKHRTEVYVMTVTQ---ELPEWEDSRLMGRKRQWF 462
           G +G  G+    F+  + ++        ++Q   E+PEW  S+  G     F
Sbjct: 501 GRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEWLGSKSYGGSADQF 552



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 452 GNGSPLMMPWLSSPFTSQSSVTTFNNCVVP 541
           G  +  M+P + +  + ++   T NNC  P
Sbjct: 207 GKTAAFMLPIIHNLLSDKNPPNTENNCAQP 236


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 364 LGSRILQDIVLVSRSLRLPQV 302
           +G   + +IVLV  S R+P+V
Sbjct: 154 IGKSAVHEIVLVGGSTRIPKV 174


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 364 LGSRILQDIVLVSRSLRLPQV 302
           +G   + +IVLV  S R+P+V
Sbjct: 154 IGKSAVHEIVLVGGSTRIPKV 174


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 563 RLRITFPVSVFKRLEEIHLPVC*HG 637
           R+ +   ++VFKR+  I  P   HG
Sbjct: 400 RISVETKLNVFKRIGNIKAPGVCHG 424


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 563 RLRITFPVSVFKRLEEIHLPVC*HG 637
           R+ +   ++VFKR+  I  P   HG
Sbjct: 402 RMSVETKLNVFKRIGNIKAPGVCHG 426


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 563 RLRITFPVSVFKRLEEIHLPVC*HG 637
           R+ +   ++VFKR+  I  P   HG
Sbjct: 400 RMSVETKLNVFKRIGNIKAPGVCHG 424


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 563 RLRITFPVSVFKRLEEIHLPVC*HG 637
           R+ +   ++VFKR+  I  P   HG
Sbjct: 402 RMSVETKLNVFKRIGNIKAPGVCHG 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,766
Number of Sequences: 336
Number of extensions: 3534
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)