Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29p13
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.65 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   1.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   4.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   6.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.1  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   8.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 24/88 (27%), Positives = 39/88 (44%)
 Frame = +3

Query: 306 CQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQN 485
           CQK  TKL N +  ++  +  +  N  +EK     ++ L  +     H    TE   K+ 
Sbjct: 10  CQKKPTKLRNLIYKTEAFDSLHAGN--AEKTLCSGQVCLGSVMQLPIHG---TEPRSKE- 63

Query: 486 EQILHEIDEIKTKLNGIRTVKHNKHRYR 569
           E +LH  D ++   + IR +    HR R
Sbjct: 64  EILLHAKDFLEQYFSSIRRLNSEAHRIR 91


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 204 CCFCESKYHTKCMNETAKSICEGGDRG 284
           C FC  +Y TK    T KS+   G  G
Sbjct: 38  CEFCNRRYRTKNSLTTHKSLQHRGSSG 64


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 34  YKLNYNKNC 8
           YK NYN NC
Sbjct: 96  YKYNYNNNC 104


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -1

Query: 288 DIPDLLLRRYF*PFHSYTSYGISIRKNNI*YFQRAEVFCDSTH 160
           ++P  ++R +  P H +    ISI KN    F   + F  + H
Sbjct: 529 NVPGAVVRVFLGPKHDHQGRPISISKNQH-LFVELDQFIQNLH 570


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 262 ILLAVSFIHFVWYFDSQKQHLILSACRSVL*QYAQTILWKFDSRECTQLNSIKTLMNIS- 86
           + + V+ I   W F   + H +    R +  +Y  TIL     ++ T+L  +  + N++ 
Sbjct: 309 VSILVTVIIINWNFRGPRTHRMPQLIRKIFLKYLPTILMMRRPKK-TRLRWMMEIPNVTL 367

Query: 85  KTST 74
            TST
Sbjct: 368 PTST 371


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 227 PYEVYE*NG*KYLRRRRSGISMEMRCLPKIC 319
           PY +   NG K L +   G  + ++CL  +C
Sbjct: 362 PYPLNTTNGRKGLLKGGGGYLLGIQCLTVVC 392


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 271 EEIGDINGNALFAKNLQQNCRMKF 342
           EEIG ++   ++  +++  CR  F
Sbjct: 393 EEIGMVDNTTIYKYDVRDGCRTPF 416


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 219 SKYHTKCMNETAKSI 263
           SKY  KC+ ET  +I
Sbjct: 37  SKYRKKCIGETKTTI 51


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 156 VCAYCHRTLRHAESI 200
           VCA CH+  R   S+
Sbjct: 403 VCALCHKVFRTLNSL 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,911
Number of Sequences: 438
Number of extensions: 3358
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)