Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29p12
         (182 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    19   7.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    18   9.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    18   9.5  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    18   9.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 64  KLGLEKTC 41
           K+GLE TC
Sbjct: 209 KMGLESTC 216


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 22  LIFY*IYKFFLIQVY 66
           L+F   + ++LIQ+Y
Sbjct: 235 LLFKREFSYYLIQIY 249


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 22  LIFY*IYKFFLIQVY 66
           L+F   + ++LIQ+Y
Sbjct: 235 LLFKREFSYYLIQIY 249


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 64 KLGLEKTCIFNK 29
          KLG  + C+F K
Sbjct: 51 KLGCFEACVFQK 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,811
Number of Sequences: 438
Number of extensions: 157
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)