Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29p06
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011472-1|AAR99130.1| 1284|Drosophila melanogaster RE18634p pro...    30   2.5  
AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB...    30   2.5  
AF220496-1|AAF33245.1|  781|Drosophila melanogaster arm repeat p...    29   4.4  
AE013599-17|EAA45985.1|  781|Drosophila melanogaster CG17484-PA,...    29   4.4  

>BT011472-1|AAR99130.1| 1284|Drosophila melanogaster RE18634p
           protein.
          Length = 1284

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +1

Query: 460 QASLNHGTLFYSTNFEYECIKNMRLKYGK-KNITNLILIQNKSHKN*YFAEYVLRSGI 630
           +A LN GT + + N +++  + + +  G  +N+T++ L Q + H N Y  EY +  GI
Sbjct: 70  KARLNAGTSWSAKNSDFD--QRLIIDLGVVRNVTHIAL-QGRPHSNEYVTEYTISYGI 124


>AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB,
           isoform B protein.
          Length = 1366

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +1

Query: 460 QASLNHGTLFYSTNFEYECIKNMRLKYGK-KNITNLILIQNKSHKN*YFAEYVLRSGI 630
           +A LN GT + + N +++  + + +  G  +N+T++ L Q + H N Y  EY +  GI
Sbjct: 70  KARLNAGTSWSAKNSDFD--QRLIIDLGVVRNVTHIAL-QGRPHSNEYVTEYTISYGI 124


>AF220496-1|AAF33245.1|  781|Drosophila melanogaster arm repeat
           protein protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 349 SIVIFNTISSILNLDIVCTHEKRNLGSKFG 260
           S++  N  S+ +N+D+  THE  N+ S+FG
Sbjct: 9   SLIGLNMNSTHINMDLSLTHEPANMQSQFG 38


>AE013599-17|EAA45985.1|  781|Drosophila melanogaster CG17484-PA,
           isoform A protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 349 SIVIFNTISSILNLDIVCTHEKRNLGSKFG 260
           S++  N  S+ +N+D+  THE  N+ S+FG
Sbjct: 9   SLIGLNMNSTHINMDLSLTHEPANMQSQFG 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,407,979
Number of Sequences: 53049
Number of extensions: 488313
Number of successful extensions: 733
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)