Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29p05
         (462 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    29   1.2  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   3.7  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   3.7  
Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U80842-13|AAB37943.1|  208|Caenorhabditis elegans Hypothetical p...    27   8.6  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
 Frame = +3

Query: 3   SIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDPEESEKDEQQA 146
           SIGLMWW+LARE+L LRG + R   +     +++ DL+FYRDP E+EK+E  A
Sbjct: 170 SIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEKEETGA 222


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 257 CCTRCSSCFWSTPCSRRMVCP 319
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -1

Query: 306  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 211
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -1

Query: 306  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 211
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 224 WLQCFIPVFMDRSNYFWFSWYHS 156
           WL CF  +       F+ +W+HS
Sbjct: 302 WLNCFSEMMQFADRQFYLNWWHS 324


>U80842-13|AAB37943.1|  208|Caenorhabditis elegans Hypothetical
           protein ZC239.2 protein.
          Length = 208

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 386 WIRSRLECCINTLHWLI 436
           WIR R+   +N+ HWLI
Sbjct: 138 WIRERILNIVNSTHWLI 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,984,037
Number of Sequences: 27780
Number of extensions: 141635
Number of successful extensions: 504
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)