Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29p02
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 36 0.008
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 35 0.010
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 31 0.13
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.17
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 31 0.22
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 30 0.39
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 30 0.39
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 30 0.39
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 29 0.51
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 29 0.51
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 0.68
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.68
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 29 0.68
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 29 0.89
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 28 1.2
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 1.2
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 28 1.2
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 28 1.6
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 2.1
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 27 2.1
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 2.1
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.7
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 27 2.7
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 27 3.6
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 27 3.6
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 3.6
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.6
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 4.8
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 26 4.8
SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces pom... 26 4.8
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 26 6.3
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 8.3
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 25 8.3
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 25 8.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 8.3
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 25 8.3
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 35.5 bits (78), Expect = 0.008
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Frame = +1
Query: 97 GKDLNVSTQFGSNCEQVENRIGEDNEMASSREI-VSHDLNSSTPEPPNSFNDASNISLPT 273
G D S Q G+N E V + ED AS E+ ++ +S+ N F+D S+ S
Sbjct: 121 GSDSQASIQSGTNSEVVSDD-EEDGNFASIPELHEDNEYHSNLATSSNPFSDGSS-SKSA 178
Query: 274 NNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTVINIIKT 453
+ S + S ++ AS S N + T ++ + +Q+ + S ++ T
Sbjct: 179 SLTASSAAASPTVSFSPASTSENLTPTSSKSLASNTSLVQSFNSASRSS---SISGNQYT 235
Query: 454 QQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLR 555
+ K + T+SA S+ P + S +++
Sbjct: 236 YNLLGKSTDESPKITISAGTSMSHFPSASSKLIQ 269
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 35.1 bits (77), Expect = 0.010
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Frame = +1
Query: 166 DNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPN- 342
+ E +S EI S N STP +SF D PT+ + S + T + + S
Sbjct: 368 ETETITSSEISSIIYNFSTPISGSSFPDGFKPINPTSFPSLTSSTKKIPSTTLPTSSKMI 427
Query: 343 TSTTKTRINQPQS--LFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDS 516
T+TT + N QS L I T E S F V ++ T + ++ + P S
Sbjct: 428 TTTTPSVSNNTQSSFLIISTFTSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSS 487
Query: 517 LMSAPPSYSFV 549
+S +S V
Sbjct: 488 YLSNTTLHSSV 498
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 31.5 bits (68), Expect = 0.13
Identities = 27/103 (26%), Positives = 42/103 (40%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNE 414
N + IS+ N N S ++S++ R +SP T K P S ++ + K
Sbjct: 389 NKLQQFATISILNNTNATSHLGNQSVRERAPEESPMTFLQKKMAALPTSSPVRPMLKPTL 448
Query: 415 DSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYS 543
+ ++ QE+ +ND HT S S S PS S
Sbjct: 449 QLQNSPLSKLV--PQEVGN-KVNDSIHTTSNQPSKFSLNPSIS 488
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.17
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = +1
Query: 100 KDLNVSTQFGSNCEQVENRIGEDN--------EMASSREIVSHDLNSSTPEPPNSFNDAS 255
+DLN S GS E D E SS S +SS+P P ++
Sbjct: 58 EDLNASLSTGSPVEITSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLP------ST 111
Query: 256 NISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQP 375
+ S T+ ++P S S+ T I P TST+ T I P
Sbjct: 112 STSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 151
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 211 NSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTST 351
++STP PP S + S P + S + S SI S +P T T
Sbjct: 312 STSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPT 358
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 211 NSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTST 351
++STP PP S + S P + S + S SI S +P T T
Sbjct: 366 STSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPT 412
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 145 VENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVS 297
+ NRIG +++ ++R+ S + S P+ PNS + S+ N + P V+
Sbjct: 373 ISNRIGSVDDLLNTRQFTSSPIGGSMPKGPNSIYKIPSASM-VNLSSPLVT 422
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 29.9 bits (64), Expect = 0.39
Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +1
Query: 208 LNSSTPEPPNSFNDASNISLPTNNNVPSVSLS---RSIQTRIASDSPNTSTTKTRINQPQ 378
L + TP P NS + +N +P+++ S+ S S + +S++ +TS++ I
Sbjct: 436 LTTITPSPSNSISYTNNTFIPSSSIKSSIVYSVTPTSAENYTSSEAFSTSSSLVVIPPVN 495
Query: 379 SLFIQALTKLNE-DSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLR 555
S + + T + S+ + ++ + ++L + + +LS P + + P S S V
Sbjct: 496 SSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTPST--TIPTSNSSVSL 553
Query: 556 QIAA 567
Q ++
Sbjct: 554 QTSS 557
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 29.9 bits (64), Expect = 0.39
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 223 PEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALT 402
P+ PN+ N +N+SL + + + + +Q IA D + KT L + L
Sbjct: 1062 PDHPNTINSFTNLSLMLHGSEKFIQSQKCLQ--IAVDLSDKIFGKTTPTASLYLQLAQLM 1119
Query: 403 KLNEDSVKFTVINIIKTQQEMAKMALN-DDQHTLSA 507
LN+DS + ++ ++ ++ K L D Q+T A
Sbjct: 1120 VLNKDS--RSALHAVRVAYDILKETLGPDHQNTKEA 1153
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Frame = +1
Query: 181 SSREIVSHDLNSSTPEPPNSFNDASNISLPTN--NNVPSVSLSRSIQTRIASDSPNTSTT 354
S+ + S ++ S P P S N + PT N +V + S+ T + P T
Sbjct: 57 STHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVN 116
Query: 355 KTRINQPQSLFIQALT 402
T P + + T
Sbjct: 117 STTTVVPPTTHVNTTT 132
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 29.5 bits (63), Expect = 0.51
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = +1
Query: 157 IGEDNEMAS-SREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASD 333
+G D A + E+VS DL + TPE + + I+LP + + + S + S
Sbjct: 151 LGADGAAAMPTNELVSVDLYNQTPEISDLTSPPPPINLPLSYSATGAATSNCPPKYVRST 210
Query: 334 ---SPNTSTTKTRINQPQSLFIQALTKL-NEDSVKFTVINIIKTQQEMAKMALN 483
P T++ + P +L I+ T L ED V + I ++ +M +N
Sbjct: 211 INCVPTTNSLLKKSKIPFALVIRPYTSLVEEDDPVPVVTDTIISRCRRCRMYIN 264
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 29.5 bits (63), Expect = 0.51
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 163 EDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPN 342
+D E ASS+ +S L S+ EPP S S + PT +N S++ ++ + + S+S
Sbjct: 234 QDRE-ASSKNCLSKALAFSSIEPPASSASTSPRNTPTPSN-NGTSINANVTSSLTSNSTG 291
Query: 343 TSTTKT 360
T+KT
Sbjct: 292 -KTSKT 296
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.1 bits (62), Expect = 0.68
Identities = 27/123 (21%), Positives = 50/123 (40%)
Frame = +1
Query: 166 DNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNT 345
D+E SS + NSS E +S + + + S ++ + S S S + +S+ N+
Sbjct: 260 DSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNS 319
Query: 346 STTKTRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMS 525
+T T + + T +E+S + K + K DD+ + S S +
Sbjct: 320 NTDTTTSGEVSAQSSTNSTS-SEESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTT 378
Query: 526 APP 534
P
Sbjct: 379 KTP 381
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.68
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 496 TLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPP 636
T+SAP+S++S PPS+ AA P T + P P PPP
Sbjct: 157 TVSAPNSMVSPPPSFQ---PPSAAAPATSLPSDYNPPPP----PPPP 196
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 29.1 bits (62), Expect = 0.68
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Frame = +1
Query: 109 NVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVP 288
NV++ N ++ + + S+ I + T P S + SN ++PT + VP
Sbjct: 63 NVASNTSENYPYTGSKSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVP 122
Query: 289 SVS---LSRSI---QTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTV 435
+ S S SI T +S S + ST T I + F + D+V+ +
Sbjct: 123 TTSSTPTSSSILSNSTIPSSSSISASTITTTIISGSTQFTTTFVDQSIDTVEVVI 177
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 28.7 bits (61), Expect = 0.89
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 175 MASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTT 354
+A +R + + ++ PE P+S N S PT + P SI AS T+ +
Sbjct: 233 LAPNRSATNTPVENTHPENPDS-----NTSTPTTRSEPLAGEGASIDAENASSRQETTPS 287
Query: 355 KTRINQPQSLF 387
+R + SLF
Sbjct: 288 DSRPSTLTSLF 298
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = +1
Query: 214 SSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQ 393
SS PPN+ + +N P + I ++SD P+T Q S F
Sbjct: 242 SSPFSPPNAHSRRRKSQGKDQSNTPVIKAPAPIPFSVSSDPPSTMGRSNSAVQSPSYFAH 301
Query: 394 ALTKLNEDS 420
+L E S
Sbjct: 302 SLVNSTEFS 310
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLN 411
N + PT+ + VS + +T ++S+S TST T I L+ +T N
Sbjct: 66 NGITPGTTTIYPTSISTSGVSSNNIDETSVSSESIITSTITTTITSGSQLYTTTITGQN 124
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +1
Query: 199 SHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRS-IQTRIASD-SPNTSTTKTRINQ 372
S+ + SS+ + + +SNI++ ++ PS++ S S + IAS S NT +T+ +
Sbjct: 901 SYSIPSSSSRNEGTTSYSSNITVTSSTLKPSLTSSVSTASSYIASSASSNTLSTEPKTFS 960
Query: 373 PQSLFIQALTKLNEDSV 423
S ++++ +N +S+
Sbjct: 961 SSSTLSESISSINTNSL 977
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 28.3 bits (60), Expect = 1.2
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +1
Query: 211 NSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSP----NTSTTKTRINQPQ 378
N +TP P SF + S + +NNN PS + S + + S+ P ++T+KT
Sbjct: 891 NLTTPSPAFSFGNNSGVKASSNNN-PSTNSSTAPFSFGTSNKPAFSFGSATSKTTSEGTA 949
Query: 379 SLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQ 558
+ + F N ++E MA + +AP S + +SF
Sbjct: 950 PAASASAPAPTTSAFSFGASNSSMNKEENTPMAKDAGD---TAPASGFKS--GFSFGANN 1004
Query: 559 IAARPRTRFMGTFIPSPS 612
+ +P + F GT P+PS
Sbjct: 1005 -SPQPASMF-GTSTPAPS 1020
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +1
Query: 538 YSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYA----SAFDVYVDNPMPRPSRIY 699
+ F + I R RT+ IP +F T PP Y + ++ + NPMP S+ Y
Sbjct: 48 FFFFIIGIINRRRTKKGQATIPFTNFYPLTAPPPYTAEPEARYNSTIHNPMPPMSQAY 105
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 562 LSASKQMNTRAVHSLTNLARSKCADRHLAPSLPFP 458
L SK+ +++ H + N R+K A + A S+PFP
Sbjct: 847 LDPSKRKDSKLKHVIINEKRNKKAAKLTADSVPFP 881
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 27.5 bits (58), Expect = 2.1
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Frame = +1
Query: 130 SNCEQVENRIGEDNEMASSREIVSHDLNSSTPE--PPNSFNDASNISLPTNNNVPSVSLS 303
SN N +N S+ S + S+P P N F S S+ T N +PS+ S
Sbjct: 111 SNSGNFANNSISNNCWNSAYNSNSFEGTGSSPNFPPQNQFLSDSRSSIATLNAIPSLDQS 170
Query: 304 RSIQTRIASDSPNT------STTKTRINQPQSLFIQALTKLNEDSVKFTVINII 447
+ + + +P+ T ++ S +L++ + D ++ ++I I+
Sbjct: 171 VLLNPNLRARTPSLVPEHYFDDTDKSVHSKSSSGSNSLSEASNDDLESSIIQIV 224
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 157 IGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDS 336
IGE N +++ + P PN+ + + SLP+ PS S ++ A D
Sbjct: 440 IGESNSLSNQPNNFAQTSFDYQPNHPNAISPKAKFSLPSR---PSYHKDNSFISKQAIDK 496
Query: 337 PNTSTTKTRINQ 372
N R+ +
Sbjct: 497 SNPFEEALRLER 508
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 253 SNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLN 411
S +S+ ++ S S S+ T + + PQSL+++ L KLN
Sbjct: 526 SKLSVESDETAVSASSGESVPTDSTLTDTKSKSVFVHPPSPQSLYVEKLEKLN 578
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 27.1 bits (57), Expect = 2.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 232 PNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTT---KTRINQPQSLFIQALT 402
P ND S SL + + ++S T IA + NT+ T KT+ N S T
Sbjct: 687 PEVLNDRSLASLSASRHADAISSKSKQHTEIAQPAFNTTGTVLMKTKSNLSDSAL---ST 743
Query: 403 KLNEDSVKFTV 435
+ DSV F +
Sbjct: 744 PQHSDSVLFDI 754
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/70 (20%), Positives = 33/70 (47%)
Frame = +1
Query: 391 QALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAAR 570
Q L K +D+++F ++ ++ +M + D + + + Y F ++ A+
Sbjct: 270 QPLAKKYQDTLRFAFLDAVRYGAVAKQMNVESDWPAFVIAN--LKSMLKYPFPTTELTAK 327
Query: 571 PRTRFMGTFI 600
T+F+G F+
Sbjct: 328 AMTKFVGDFV 337
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = +1
Query: 139 EQVENRIGEDNEMASSREI------VSHDLNSSTPEPPNSFN 246
E++E ++ +E SS VS +LNS P P NS+N
Sbjct: 447 EELERKMSHGDEAVSSSSASRFMSKVSSNLNSGNPTPYNSYN 488
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.6
Identities = 27/121 (22%), Positives = 46/121 (38%)
Frame = +1
Query: 127 GSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSR 306
G + +EN + + SS+E +S N STP S N + VS+
Sbjct: 31 GVHSSLLENSLNSIDSFISSKEEISWCGNQSTPIATKSHLSCINPQYVNPFDTSPVSVDT 90
Query: 307 SIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALND 486
Q D+P S + ++ QS+ L+ + + N+ K Q + M+
Sbjct: 91 EFQDTYLLDAP--SFAQPHFSERQSVDKTRSRCLSRNRRRKRHPNLHKNHQRLLGMSFPQ 148
Query: 487 D 489
D
Sbjct: 149 D 149
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 244 NDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSL 384
N N + T + LS S+Q ++ SP+ T+++R+ Q QSL
Sbjct: 35 NGGENSVMDTEESSAIDKLSASLQ-QVNISSPSVPTSQSRVTQGQSL 80
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +1
Query: 178 ASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTK 357
+SS+ S +S + +S + +S+ S ++ + S S S+S ++ +S S TSTT
Sbjct: 174 SSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKS-SSKFSSSSFITSTTP 232
Query: 358 TRINQPQSLFIQALTKLNEDS 420
+ ++ A T +DS
Sbjct: 233 ASSSSSGAIVSNAKTASTDDS 253
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 173 SLSSPIRFSTCSQLLPNCVDTFKSLPSIFYKNVAINCYCFPIYE 42
+L +P F TC + N +D F L S + N+ + Y YE
Sbjct: 128 TLLNPKLF-TCKNIYKNAIDAFNGLLSDWCSNIFLPGYLLFFYE 170
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 251 ASLKEFGGSGVEEFKSCETISRELAISLSSPIRFSTCSQLLPNCVDTFKSLPSIF 87
+SL + + KS IS++ ++ L+S + S L KS+PSIF
Sbjct: 255 SSLDSLAKKRMSKSKSTPQISKKFSVPLNSASKSPIGSSLFKTSDSRKKSVPSIF 309
>SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 208 LNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRS 309
+ S EPP S N + N+VP+VS R+
Sbjct: 74 IRESEREPPQSHNSVFQLLSKIRNSVPNVSAFRN 107
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 33 SLKFVNRETITVYCYVFIENGRQGFKCVY 119
SL +V RET +V CY +NG +CV+
Sbjct: 258 SLLYVLRETSSVSCYELTKNGVN--RCVF 284
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 622 HTPPPNYASAFDV 660
+TPPPNY FDV
Sbjct: 595 NTPPPNYDELFDV 607
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 130 SNCEQVENRIGEDNEMASSREIVS 201
S QVENR DNE + +E++S
Sbjct: 281 SGTNQVENRKRFDNEFSIEKEVIS 304
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 119 HSLEVIVSR*KTESVKIMKWPVHEKLFHTT 208
HSLE +V + TES+ + + + E++FH T
Sbjct: 476 HSLETVVDKAYTESINHLVY-LMEEVFHLT 504
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 208 LNSSTPEPPNSFN-DASNI--SLPTNNNVPSVSL-SRSIQTRIASDSPNTSTTK 357
L++STP PPNS N + S + S+P++ + S S S Q+ + S + T +
Sbjct: 233 LSTSTPAPPNSNNANPSTLFSSIPSSRHTTSNHFPSNSAQSSLFSPTARPLTAR 286
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 25.4 bits (53), Expect = 8.3
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 229 PPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPN---TSTTKTRINQPQSLFIQAL 399
P SF S + + N+NVPS S S++ + SPN ST+K I QS Q L
Sbjct: 236 PVPSFRPTSALKVNMNSNVPS---SDSVR----NSSPNQYYASTSKQSI-PSQS---QNL 284
Query: 400 TKLNEDSVKFTVINIIKTQQEMAKMALND---DQHTLSAPDSLMSAPPSYS 543
+ SV TV N Q + + ++LND Q +S+P S P S S
Sbjct: 285 QPPQKASVLGTVNNY--RQYQNSFISLNDYQAAQSNISSPSSRFPTPYSPS 333
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,109,305
Number of Sequences: 5004
Number of extensions: 67410
Number of successful extensions: 287
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -