Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29p02
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209034-1|BAD92271.1| 713|Homo sapiens Paxillin variant protein. 33 1.0
Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein. 33 1.4
BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial transcrip... 33 1.4
BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial transcrip... 33 1.4
BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial transcrip... 33 1.4
BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial transcrip... 33 1.4
AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial transcrip... 33 1.4
AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial transcrip... 33 1.4
U90661-1|AAB50242.1| 1441|Homo sapiens steroid receptor coactiva... 31 4.2
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 30 9.7
AK022492-1|BAB14056.1| 619|Homo sapiens protein ( Homo sapiens ... 30 9.7
AK000190-1|BAA90997.1| 466|Homo sapiens protein ( Homo sapiens ... 30 9.7
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 30 9.7
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 30 9.7
>AB209034-1|BAD92271.1| 713|Homo sapiens Paxillin variant protein.
Length = 713
Score = 33.1 bits (72), Expect = 1.0
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 286 PSV-SLSRSIQTRIASDSPNTSTTKTRINQPQSLF-IQALTKLNEDSVKFTVINIIKTQQ 459
PSV SL +++ + S P + + ++ PQ + Q T+++ S + ++ +
Sbjct: 222 PSVESLLDELESSVPSPVPAITVNQGEMSSPQRVTSTQQQTRISASSATRELDELMAS-- 279
Query: 460 EMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTP 630
++ + LSAP SAP SY + P T IPSP HTP
Sbjct: 280 -LSDFKTSSSTVALSAPGLSSSAPSSYCSLPPSPPPMPSVFLPPTTIPSPRGQGHTP 335
>Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial
transcription termination factor, precursor protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial
transcription termination factor precursor variant
protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial
transcription terminator factor protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 REIVSHDL---NSSTPEPPNSFNDASNISLPTNNN-VPSVSLSRSIQTRIASDSPNTSTT 354
R+IV+ DL N P + F +N++L N + SV L+R R+ +++P T +
Sbjct: 147 RKIVTSDLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSN 206
Query: 355 KTRINQPQSLFIQA 396
+N+ F+QA
Sbjct: 207 SLDLNKQMVEFLQA 220
>U90661-1|AAB50242.1| 1441|Homo sapiens steroid receptor
coactivator-1 protein.
Length = 1441
Score = 31.1 bits (67), Expect = 4.2
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Frame = +1
Query: 253 SNISLP-TNNNV-PSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVK 426
S +S+P N +V PS+S + + N++ TRIN+ QS + + + N + +
Sbjct: 379 SGMSIPRVNPSVNPSISPAHGVARSSTLPPSNSNMVSTRINRQQSSDLHSSSHSNSSNSQ 438
Query: 427 FTVINIIKTQQEMAKMALNDDQHT--LSAPDSLMSAPP--SYSFVLRQIAARPRTRFMGT 594
+ Q +A +ALN Q + S P ++ PP L Q + PR +
Sbjct: 439 GS-FGCSPGSQIVANVALNKGQASSQSSKPSLNLNNPPMEGTGISLAQFMS-PRRQVTSG 496
Query: 595 FIPSPSFIQHTPPPNYAS 648
P ++ PPN ++
Sbjct: 497 LATRPRMPNNSFPPNIST 514
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRIN----QPQSLFIQALT 402
NSF+ AS +P + P+ SLS + +S S ++TT N +PQ L +L
Sbjct: 2294 NSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLP 2353
Query: 403 KLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTR 582
+ S + ++I QQ+ ++ ++ P M ++ ++A +
Sbjct: 2354 SASHFSQLSCMPSLIAQQQQNPQVYVSQSA-AAQIPAFYMDTSHLFNTQHARLAPPSLAQ 2412
Query: 583 FMG--TFIPSPSFIQHTPPPNYA 645
G + P+ +Q P P YA
Sbjct: 2413 QQGFQPGLSQPTSVQQIPIPIYA 2435
>AK022492-1|BAB14056.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ12430 fis, clone MAMMA1003150, weakly similar to
HYPOTHETICAL 118.4 KD PROTEIN IN BAT2-DAL5 INTERGENIC
REGION ).
Length = 619
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRIN----QPQSLFIQALT 402
NSF+ AS +P + P+ SLS + +S S ++TT N +PQ L +L
Sbjct: 131 NSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLP 190
Query: 403 KLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTR 582
+ S + ++I QQ+ ++ ++ P M ++ ++A +
Sbjct: 191 SASHFSQLSCMPSLIAQQQQNPQVYVSQSA-AAQIPAFYMDTSHLFNTQHARLAPPSLAQ 249
Query: 583 FMG--TFIPSPSFIQHTPPPNYA 645
G + P+ +Q P P YA
Sbjct: 250 QQGFQPGLSQPTSVQQIPIPIYA 272
>AK000190-1|BAA90997.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ20183 fis, clone COLF0283. ).
Length = 466
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRIN----QPQSLFIQALT 402
NSF+ AS +P + P+ SLS + +S S ++TT N +PQ L +L
Sbjct: 131 NSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLP 190
Query: 403 KLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTR 582
+ S + ++I QQ+ ++ ++ P M ++ ++A +
Sbjct: 191 SASHFSQLSCMPSLIAQQQQNPQVYVSQSA-AAQIPAFYMDTSHLFNTQHARLAPPSLAQ 249
Query: 583 FMG--TFIPSPSFIQHTPPPNYA 645
G + P+ +Q P P YA
Sbjct: 250 QQGFQPGLSQPTSVQQIPIPIYA 272
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRIN----QPQSLFIQALT 402
NSF+ AS +P + P+ SLS + +S S ++TT N +PQ L +L
Sbjct: 2294 NSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLP 2353
Query: 403 KLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTR 582
+ S + ++I QQ+ ++ ++ P M ++ ++A +
Sbjct: 2354 SASHFSQLSCMPSLIAQQQQNPQVYVSQSA-AAQIPAFYMDTSHLFNTQHARLAPPSLAQ 2412
Query: 583 FMG--TFIPSPSFIQHTPPPNYA 645
G + P+ +Q P P YA
Sbjct: 2413 QQGFQPGLSQPTSVQQIPIPIYA 2435
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 235 NSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRIN----QPQSLFIQALT 402
NSF+ AS +P + P+ SLS + +S S ++TT N +PQ L +L
Sbjct: 1317 NSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLP 1376
Query: 403 KLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTR 582
+ S + ++I QQ+ ++ ++ P M ++ ++A +
Sbjct: 1377 SASHFSQLSCMPSLIAQQQQNPQVYVSQSA-AAQIPAFYMDTSHLFNTQHARLAPPSLAQ 1435
Query: 583 FMG--TFIPSPSFIQHTPPPNYA 645
G + P+ +Q P P YA
Sbjct: 1436 QQGFQPGLSQPTSVQQIPIPIYA 1458
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,902,853
Number of Sequences: 237096
Number of extensions: 2327025
Number of successful extensions: 5260
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5243
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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