Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29o24
(488 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1721 - 39426957-39428005,39428812-39428839 111 4e-25
05_04_0255 + 19462668-19462695,19463443-19464491 109 2e-24
08_01_0142 - 1121762-1122822,1123087-1123114 107 4e-24
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 103 6e-23
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 98 4e-21
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 54 5e-08
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 31 0.50
01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888 30 1.1
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 29 2.0
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 29 2.6
12_02_0197 + 15392427-15392617,15392743-15393271 28 3.5
06_02_0240 + 13397512-13397856 28 4.6
05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836... 28 4.6
12_02_1168 + 26651863-26651974,26652087-26652290,26652392-266525... 27 6.1
06_03_1000 - 26778993-26779478 27 6.1
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 27 6.1
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 27 8.1
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 111 bits (266), Expect = 4e-25
Identities = 55/94 (58%), Positives = 69/94 (73%)
Frame = +1
Query: 205 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 384
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF++ L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGAL-Q 67
Query: 385 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
++SGVILF ETLYQK DG P V +L++ G++PG
Sbjct: 68 HLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPG 101
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 109 bits (261), Expect = 2e-24
Identities = 55/94 (58%), Positives = 67/94 (71%)
Frame = +1
Query: 205 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 384
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF + L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGAL-Q 67
Query: 385 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
+SGVILF ETLYQK DG P V +L++ G++PG
Sbjct: 68 YLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPG 101
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 107 bits (258), Expect = 4e-24
Identities = 55/94 (58%), Positives = 67/94 (71%)
Frame = +1
Query: 205 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 384
++EL + A I P KGILAADESTGT+GKRL IGVEN EENRR R+LLF++ L +
Sbjct: 9 KDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLFTAPGAL-D 67
Query: 385 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
+SGVILF ETLYQ DGTP V +L G++ G
Sbjct: 68 CLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAG 101
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 103 bits (248), Expect = 6e-23
Identities = 52/92 (56%), Positives = 64/92 (69%)
Frame = +1
Query: 211 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENI 390
EL K A+ I P KGILAADESTGT+GKRL I VEN E NR+ R+LLF++ + +
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAF-QYL 260
Query: 391 SGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
SGVILF ETLYQ GTP V +L+ G++PG
Sbjct: 261 SGVILFEETLYQSTAAGTPFVDVLKAGGVVPG 292
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 97.9 bits (233), Expect = 4e-21
Identities = 49/93 (52%), Positives = 63/93 (67%)
Frame = +1
Query: 208 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 387
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ YR LL ++ L +
Sbjct: 43 DELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQY 101
Query: 388 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
ISG ILF ETLYQ DG +V +L ++ I+PG
Sbjct: 102 ISGAILFEETLYQSTVDGKKIVDILTEQKIVPG 134
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 54.4 bits (125), Expect = 5e-08
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 GKRLQDIGVE-NTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLE 465
G+ +D+ E + NR+ YR LL ++ L + ISG ILF ETLYQ DG +V +L
Sbjct: 176 GRVERDVREEAGVDRNRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTVDGRRIVDVLA 234
Query: 466 KKGIIPG 486
++GI+PG
Sbjct: 235 EQGIVPG 241
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 292 KRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKK 471
+R Q I V N+ + + +L+ + + V + +I+ TL+Q + DG P+ LL+
Sbjct: 582 RRSQFIDVFNSSPDETAFFRLMLNREGV----VGSLIMIQPTLFQYSFDGPPIPVLLDVS 637
Query: 472 GIIP 483
I P
Sbjct: 638 SISP 641
>01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888
Length = 215
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 305 SCKRLPIVPVDSSAARIPFAG 243
+C +LP+VP+D++AA FAG
Sbjct: 142 TCDKLPVVPLDAAAAHSIFAG 162
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 256 ILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKA 432
ILA++E++ GK+ +D +++ + LL +LSE +S + H L QKA
Sbjct: 515 ILASNENSRRKGKKKKDHSKDSSRDTAFPSSCLLLQCYVLLSEGLSMRFIQHFDLLQKA 573
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -1
Query: 299 KRLPIVPVDSSAARIPFAGATIA*AIFLSSSCS 201
K L IV +SS ARIP ++IA +FLS S S
Sbjct: 562 KDLGIVSHESSNARIPLHVSSIAHQLFLSGSAS 594
>12_02_0197 + 15392427-15392617,15392743-15393271
Length = 239
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 128 RSQDGGRGSVPKQQCP 175
R ++GGRGS PKQQ P
Sbjct: 32 RPREGGRGSAPKQQDP 47
>06_02_0240 + 13397512-13397856
Length = 114
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 249 KGYPGR*RIHRYNGQAFA---GHRRGEHRGEPSSL 344
+G PG R+HR+ +A + HR EHR PS L
Sbjct: 23 RGLPGTRRLHRHTLEAMSLRRCHRTVEHRTTPSLL 57
>05_07_0128 +
27879969-27880143,27880232-27881323,27883562-27883698,
27884179-27884409,27884707-27884730
Length = 552
Score = 27.9 bits (59), Expect = 4.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 95 KAKRRVKAKGHRSQDGGRGSVPKQQCPPTFN 187
+ K +++A GH G ++P+ PP+ N
Sbjct: 127 RTKNKLRAAGHHHHHGRAAALPRASAPPSTN 157
>12_02_1168 +
26651863-26651974,26652087-26652290,26652392-26652542,
26653355-26653399,26653528-26653598,26653678-26653763,
26653976-26654078,26654300-26654406
Length = 292
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +1
Query: 229 QAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILF 408
Q ++ ++D++ G + D+G R Y +L + + ENI G I +
Sbjct: 226 QEAISKLNSYFSSDKTQGNVALNQDDVGEIGLGRKGRSYLLILLRMNQLAMENIDGSIFY 285
Query: 409 H 411
+
Sbjct: 286 N 286
>06_03_1000 - 26778993-26779478
Length = 161
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 375 ALREHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHHPR 485
ALR C P PR P P G R G G PR
Sbjct: 85 ALRPATVCPPAPRKPRPAGKRMTKRCCCGGGGGGRPR 121
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 272 NPPVQWASVCRTSAWRTQRRTVVVIANCYSALTLCSPRTSLV*SCSTRPFTRRL 433
NP + +S + S R RRT V+ +C + L + S+V S F+R L
Sbjct: 473 NPVTRNSSQSKVSEKRGCRRTQVISTSCSTRLPVVESSPSVVGSSEKEEFSRLL 526
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 348 PTAIQL*RCALREHLWCDPVPRDPLPE---G*RWNPSGLPAGEEGHHP 482
P+ + L + LR +P P P P+ R NP+G+ +G+EG P
Sbjct: 14 PSLLDLQKRTLRLEKLQEPPPPPPPPQPRRSTRRNPAGVDSGDEGTAP 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,488,373
Number of Sequences: 37544
Number of extensions: 312533
Number of successful extensions: 848
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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