Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29o24
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 146 1e-35
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 146 1e-35
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 106 1e-23
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 106 1e-23
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 106 1e-23
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 2.4
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 2.4
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 28 4.2
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 28 4.2
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 5.5
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 27 7.3
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 27 7.3
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 27 9.7
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 27 9.7
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 146 bits (353), Expect = 1e-35
Identities = 68/106 (64%), Positives = 86/106 (81%)
Frame = +1
Query: 169 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 348
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 349 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPG
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPG 106
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 146 bits (353), Expect = 1e-35
Identities = 68/106 (64%), Positives = 86/106 (81%)
Frame = +1
Query: 169 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 348
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 349 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPG
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPG 106
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 106 bits (254), Expect = 1e-23
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +1
Query: 193 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 372
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 373 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
L+++ISGVIL+ ET +Q D G LL K+GI+PG
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPG 109
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 106 bits (254), Expect = 1e-23
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +1
Query: 193 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 372
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 373 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
L+++ISGVIL+ ET +Q D G LL K+GI+PG
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPG 109
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 106 bits (254), Expect = 1e-23
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +1
Query: 193 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 372
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 373 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPG 486
L+++ISGVIL+ ET +Q D G LL K+GI+PG
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPG 109
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 199 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 342
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 343 YRQLLFSSDA 372
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 199 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 342
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 343 YRQLLFSSDA 372
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 199 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 342
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 343 YRQLLFSSDA 372
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +3
Query: 105 EG*RQRATGVRMEAGVRYQSNNVHLLSIPNS*AAGGAQEDRSSNCSSRKGYPGR*RIHRY 284
EG R+ VR E +R N ++S A + CS R P R IH +
Sbjct: 64 EGKRRSPPRVRREPPMRSPGRN-EVMSPERRYGTRSASSRSQNECSCRNRAPARSPIHDH 122
Query: 285 NGQAFAGHRR 314
+ HRR
Sbjct: 123 ERLNYRNHRR 132
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 109 PSFCL*VALFLFYLLNFYKISIQTYSTVFSY-FN 11
P C + F FY+ F+++ I ST+ Y FN
Sbjct: 256 PCICFHIPSFFFYIAPFFELEISFRSTIIIYGFN 289
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 333 PSSLSPTAIQL*RCALREHLWCDPVPRDPLP 425
P +++ T + RC + WCD PR PLP
Sbjct: 344 PDTMNSTTTLIGRC---DFDWCDDTPRVPLP 371
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 244 PAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLS-ENISGVILFHETL 420
P GI + R+ D+G + +E+ R++ + + VL ISG L+ E
Sbjct: 177 PTTGITEIEFPFKQASLRMVDVGGQRSEQ--RKWIHCFDNVNGVLFIAAISGYNLYDEDE 234
Query: 421 YQKADDGTP 447
+ DDGTP
Sbjct: 235 ENRKDDGTP 243
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 244 PAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLS-ENISGVILFHETL 420
P GI + R+ D+G + +E+ R++ + + VL ISG L+ E
Sbjct: 177 PTTGITEIEFPFKQASLRMVDVGGQRSEQ--RKWIHCFDNVNGVLFIAAISGYNLYDEDE 234
Query: 421 YQKADDGTP 447
+ DDGTP
Sbjct: 235 ENRKDDGTP 243
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 293 SVCRTSAWRTQRRTVVVIANCYSALTL--CSPRT 388
S+C S WR Q T + +A +SA L C P T
Sbjct: 117 SLCSFSKWRNQPSTPISLAFAFSAALLIHCIPLT 150
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 293 SVCRTSAWRTQRRTVVVIANCYSALTL--CSPRT 388
S+C S WR Q T + +A +SA L C P T
Sbjct: 117 SLCSFSKWRNQPSTPISLAFAFSAALLIHCIPLT 150
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 293 SVCRTSAWRTQRRTVVVIANCYSALTL--CSPRT 388
S+C S WR Q T + +A +SA L C P T
Sbjct: 117 SLCSFSKWRNQPSTPISLAFAFSAALLIHCIPLT 150
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 320 TQRRTVVVIANCYSALTLCSPRTS 391
T++ V +A+CYS+LT P TS
Sbjct: 36 TKKMRVCPVAHCYSSLTAPEPMTS 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,562,798
Number of Sequences: 27780
Number of extensions: 237657
Number of successful extensions: 695
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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