Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29o23
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061382-1|AAL28930.1|  262|Drosophila melanogaster LD30683p pro...    27   7.5  
AE014134-1829|AAF52905.1|  262|Drosophila melanogaster CG4968-PA...    27   7.5  
M23412-1|AAA28676.1|  788|Drosophila melanogaster protein ( Dros...    26   10.0 
BT025816-1|ABF85716.1|  580|Drosophila melanogaster IP02907p pro...    26   10.0 
AY058793-1|AAL14022.1|  328|Drosophila melanogaster SD10401p pro...    26   10.0 
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P...    26   10.0 
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P...    26   10.0 
AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB...    26   10.0 
AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA...    26   10.0 

>AY061382-1|AAL28930.1|  262|Drosophila melanogaster LD30683p
           protein.
          Length = 262

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 21/81 (25%), Positives = 40/81 (49%)
 Frame = +2

Query: 14  CLLQEFLEGN*EVF*ARIMDRSEQLKFVLIVVSMASCLAYSFGVFSPQFPDNDQKNVSEK 193
           CL  E+  G+ E+F A+I D S++ KF+       +C   +F     ++  ++     E 
Sbjct: 41  CLYAEY-SGD-EIFTAKIQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLISNTSAYQEF 98

Query: 194 KKDAQQKMQASRIVKTSFS*F 256
           KK A++  +  ++V+  F  F
Sbjct: 99  KKLAEESKE--KLVQLGFPSF 117


>AE014134-1829|AAF52905.1|  262|Drosophila melanogaster CG4968-PA
           protein.
          Length = 262

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 21/81 (25%), Positives = 40/81 (49%)
 Frame = +2

Query: 14  CLLQEFLEGN*EVF*ARIMDRSEQLKFVLIVVSMASCLAYSFGVFSPQFPDNDQKNVSEK 193
           CL  E+  G+ E+F A+I D S++ KF+       +C   +F     ++  ++     E 
Sbjct: 41  CLYAEY-SGD-EIFTAKIQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLISNTSAYQEF 98

Query: 194 KKDAQQKMQASRIVKTSFS*F 256
           KK A++  +  ++V+  F  F
Sbjct: 99  KKLAEESKE--KLVQLGFPSF 117


>M23412-1|AAA28676.1|  788|Drosophila melanogaster protein (
           Drosophila muscarinicacetylcholine receptor mRNA,
           complete cds. ).
          Length = 788

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 176 KNVSEKKKDAQQKMQASRIVKT 241
           +N ++KKK +Q+K Q S+  KT
Sbjct: 680 RNAAKKKKKSQEKRQESKAAKT 701


>BT025816-1|ABF85716.1|  580|Drosophila melanogaster IP02907p
           protein.
          Length = 580

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 176 KNVSEKKKDAQQKMQASRIVKT 241
           +N ++KKK +Q+K Q S+  KT
Sbjct: 472 RNAAKKKKKSQEKRQESKAAKT 493


>AY058793-1|AAL14022.1|  328|Drosophila melanogaster SD10401p
           protein.
          Length = 328

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 149 SPQFPDNDQKNVSEKKKDAQQKMQASRIVKTS 244
           SPQ P  D+K+  +KK   +QK Q +  +K+S
Sbjct: 192 SPQPPVVDKKSAKQKKGKKKQKPQEASPLKSS 223


>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
            isoform A protein.
          Length = 1420

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 149  SPQFPDNDQKNVSEKKKDAQQKMQASRIVKTS 244
            SPQ P  D+K+  +KK   +QK Q +  +K+S
Sbjct: 1284 SPQPPVVDKKSAKQKKGKKKQKPQEASPLKSS 1315


>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
            isoform B protein.
          Length = 1430

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 149  SPQFPDNDQKNVSEKKKDAQQKMQASRIVKTS 244
            SPQ P  D+K+  +KK   +QK Q +  +K+S
Sbjct: 1294 SPQPPVVDKKSAKQKKGKKKQKPQEASPLKSS 1325


>AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB,
           isoform B protein.
          Length = 805

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 176 KNVSEKKKDAQQKMQASRIVKT 241
           +N ++KKK +Q+K Q S+  KT
Sbjct: 697 RNAAKKKKKSQEKRQESKAAKT 718


>AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA,
           isoform A protein.
          Length = 788

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 176 KNVSEKKKDAQQKMQASRIVKT 241
           +N ++KKK +Q+K Q S+  KT
Sbjct: 680 RNAAKKKKKSQEKRQESKAAKT 701


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,278,962
Number of Sequences: 53049
Number of extensions: 224160
Number of successful extensions: 469
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)