Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29o20
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81052-3|CAB02871.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.24
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 31 0.74
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 31 0.74
Z66521-12|CAA91397.3| 614|Caenorhabditis elegans Hypothetical p... 29 2.3
U61953-5|AAC48080.2| 297|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily ass... 29 3.9
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81527-5|CAB04273.2| 350|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81052-3|CAB02871.1| 160|Caenorhabditis elegans Hypothetical
protein D2023.4 protein.
Length = 160
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +1
Query: 433 RQDPNTKDFLYFIAKLQETPNLWDIFKQQ------KVFEIKMLTVIPEYRRQGLAVMLAE 594
R+D K FIA + E P ++F + ++ L + P++RR GLA L +
Sbjct: 42 RKDIENKAVHGFIAFIGEEPAGMNLFYYAYSTWVGQYLHMEDLYIRPQFRRMGLARTLWK 101
Query: 595 KSKELAHDQGYNIVRMD 645
K ELA D+G IVR++
Sbjct: 102 KLAELARDKG--IVRLE 116
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 31.1 bits (67), Expect = 0.74
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +1
Query: 151 QEKPENFSVCQVTSEDHEAAVDAIKRHFLSEHVLVISRN----MNVNNDRALDEYLIGLL 318
+EK E QV ED E V+ R +I N + N +E +I
Sbjct: 65 KEKTEVSGEVQV-QEDDEIIVEGTTRRVAENKKYMIFLNEDAPVRANAGSEENEVIIEKH 123
Query: 319 KQGNTLFAKDDNGS-IAG-VCVNFASSPVDPKNLRHYAFYRQDPNTKDFLYFIAKLQETP 492
Q N D+ + G + + +SSP PKNL +QD D L+ K+ +TP
Sbjct: 124 VQKNVEIRNDEEKQEVQGDLVLTLSSSPKSPKNLEKSFEVQQDDEEPDVLF--EKVVKTP 181
Query: 493 N 495
N
Sbjct: 182 N 182
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 31.1 bits (67), Expect = 0.74
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +1
Query: 151 QEKPENFSVCQVTSEDHEAAVDAIKRHFLSEHVLVISRN----MNVNNDRALDEYLIGLL 318
+EK E QV ED E V+ R +I N + N +E +I
Sbjct: 65 KEKTEVSGEVQV-QEDDEIIVEGTTRRVAENKKYMIFLNEDAPVRANAGSEENEVIIEKH 123
Query: 319 KQGNTLFAKDDNGS-IAG-VCVNFASSPVDPKNLRHYAFYRQDPNTKDFLYFIAKLQETP 492
Q N D+ + G + + +SSP PKNL +QD D L+ K+ +TP
Sbjct: 124 VQKNVEIRNDEEKQEVQGDLVLTLSSSPKSPKNLEKSFEVQQDDEEPDVLF--EKVVKTP 181
Query: 493 N 495
N
Sbjct: 182 N 182
>Z66521-12|CAA91397.3| 614|Caenorhabditis elegans Hypothetical
protein W02B12.4 protein.
Length = 614
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 169 FSVCQVTSEDHEAAVDAIKRHFLSEHVLVIS 261
FS+ V + ++A+ DA HF+S+ ++V++
Sbjct: 141 FSILNVLGDGNDASCDAFAEHFVSKEMIVVT 171
>U61953-5|AAC48080.2| 297|Caenorhabditis elegans Hypothetical
protein R08C7.4 protein.
Length = 297
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -1
Query: 368 PAIEPLSSFANNVFPCFNKPIKYSSRARSLFTFIFLEITSTCSLKKCRLIASTAASWSSD 189
P I +S N V P+KYSS A+ + +FL+ T + + W D
Sbjct: 181 PNIGEVSFTTNRVLKTEPVPVKYSSDAQLMEDMLFLKYNKTTEISTLPKHGQKGSEWELD 240
>U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily
assigned gene nameprotein 127 protein.
Length = 862
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 34 WKILVMFSLRTKCLRYLTNKTYFYSQIRKCVFGIKDL 144
W+I+ K LRYL+N +++ + ++ C F +KD+
Sbjct: 137 WEIVTTEFRYIKLLRYLSNLSFYLTDLQNCGF-LKDI 172
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -2
Query: 400 LRDCLQNSRRPLQSSHYHPLQIMCSPASINRLNIRQGHDRC 278
+R+C + ++ + + + +CSP S+ R N+ H +C
Sbjct: 74 IRECGDDKQKRILNEVSKTIMYLCSPFSLKRQNLVIEHQKC 114
>Z81527-5|CAB04273.2| 350|Caenorhabditis elegans Hypothetical
protein F35E12.6 protein.
Length = 350
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 541 LTVIPEYRRQGLAVMLAEKSKELAHDQGYNIVRMDCIXPY 660
LT + YR +++LA + + + + YNI+ +D + PY
Sbjct: 215 LTFLNLYRTPSNSMLLANDASVIENYEVYNIMVLDSVNPY 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,657,578
Number of Sequences: 27780
Number of extensions: 346708
Number of successful extensions: 1082
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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