Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29o18
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 147 6e-36
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024791-26|AAK29889.1| 421|Caenorhabditis elegans Hypothetical... 58 4e-09
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 58 6e-09
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 58 8e-09
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 58 8e-09
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 53 2e-07
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 52 4e-07
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 52 4e-07
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 48 5e-06
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 48 6e-06
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 48 6e-06
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 48 6e-06
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 48 6e-06
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 48 6e-06
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 48 6e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 48 6e-06
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 46 3e-05
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 45 6e-05
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 45 6e-05
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 44 8e-05
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 44 1e-04
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 39 0.003
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 39 0.004
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 38 0.007
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 38 0.007
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 38 0.009
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 37 0.012
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 36 0.036
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 36 0.036
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 34 0.083
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.14
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 33 0.19
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 30 1.3
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 30 1.3
AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical... 30 1.3
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.8
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 30 1.8
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 30 1.8
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.1
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 29 3.1
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 29 3.1
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 29 3.1
Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical pr... 28 5.4
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 28 5.4
U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical pr... 28 7.2
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 28 7.2
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 28 7.2
U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone... 27 9.5
U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone... 27 9.5
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 27 9.5
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 27 9.5
AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear recep... 27 9.5
AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear recep... 27 9.5
AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear recep... 27 9.5
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 27 9.5
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 27 9.5
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 27 9.5
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 27 9.5
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 147 bits (357), Expect = 6e-36
Identities = 72/160 (45%), Positives = 106/160 (66%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 354
VRI+L+G+ G GKTSL++SL+ +E+ + VP + + + IPADVTPE V T+I+D+ I E+
Sbjct: 10 VRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEED 69
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 534
+ EI +A+VIC+V+SV + T++ I T WLP +R + E + PVILVGNK D
Sbjct: 70 ENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSDGTA 129
Query: 535 YSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMXLQCTK 654
+ D I I E EV+ C+ECSA+++ NVSE+ K
Sbjct: 130 NNT-DKILPIMEANTEVETCVECSARTMKNVSEIFYYAQK 168
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 638 FYNAQKAVLHPINPIY 685
FY AQKAV++P P+Y
Sbjct: 163 FYYAQKAVIYPTRPLY 178
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 88.2 bits (209), Expect = 5e-18
Identities = 45/109 (41%), Positives = 66/109 (60%)
Frame = +1
Query: 328 IDICIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVIL 507
+D+ I E+ + EI +A+VIC+V+SV + T++ I T WLP +R + E + PVIL
Sbjct: 1 MDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVIL 60
Query: 508 VGNKIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMXLQCTK 654
VGNK D + D I I E EV+ C+ECSA+++ NVSE+ K
Sbjct: 61 VGNKSDGTANNT-DKILPIMEANTEVETCVECSARTMKNVSEIFYYAQK 108
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 638 FYNAQKAVLHPINPIY 685
FY AQKAV++P P+Y
Sbjct: 103 FYYAQKAVIYPTRPLY 118
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIP 345
R +I++LG GVGK++L + V F E P E+ +V +Q I+D
Sbjct: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
EQ ++ +V+S+ Q T N + +R ++ P+ILVGNK D
Sbjct: 62 EQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEV--PMILVGNKCD 119
Query: 526 LIDYSVI--DNIWDIAEEYPEVDRCIECSAKSLINVSEM 636
L D V+ D ++A ++ +E SAK+ INVSE+
Sbjct: 120 LEDERVVGKDQGQNLARQFGSA--FLETSAKAKINVSEV 156
>AC024791-26|AAK29889.1| 421|Caenorhabditis elegans Hypothetical
protein Y47G6A.27 protein.
Length = 421
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +1
Query: 451 WLPFVRDNCPEDYRKPVILVGNKIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVS 630
WLP +R + E ++ PVILVGNK D + D I I E EV+ C+ECSA+++ NVS
Sbjct: 86 WLPLIRQSFGEYHKTPVILVGNKSDGTANNT-DKILPIMEANTEVETCVECSARTMKNVS 144
Query: 631 EMXLQCTK 654
E+ K
Sbjct: 145 EIFYYAQK 152
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 638 FYNAQKAVLHPINPIY 685
FY AQKAV++P P+Y
Sbjct: 147 FYYAQKAVIYPTRPLY 162
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
R ++ +++G+ VGKT +++S T+ F ++VP + + + V + D
Sbjct: 6 RQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQ 65
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + FSV + + +A+ W+P +R +CP+ PVILVG K+D
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPD---APVILVGTKLD 122
Query: 526 LID 534
L D
Sbjct: 123 LRD 125
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
R ++ +++G+ VGKT +++S T+ F ++VP + + + V + D
Sbjct: 6 RQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQ 65
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + FSV + + +A+ W+P +R +CP+ PVILVG K+D
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPD---APVILVGTKLD 122
Query: 526 LID 534
L D
Sbjct: 123 LRD 125
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 57.6 bits (133), Expect = 8e-09
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 354
+++++G+ GKT L++ ++F + +VP E +V +QV + D E
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL-I 531
VI + FS+D ++L I W P VR CP P+ILVGNK DL
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP---NVPIILVGNKRDLRS 123
Query: 532 DYSVIDNIWDIAEE--YPEVDRCI----------ECSAKSLINVSEMXLQCTKGS 660
D + + + +E PE R I ECSAK+ + E+ + T+ +
Sbjct: 124 DPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAA 178
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 57.6 bits (133), Expect = 8e-09
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 354
+++++G+ GKT L++ ++F + +VP E +V +QV + D E
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL-I 531
VI + FS+D ++L I W P VR CP P+ILVGNK DL
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP---NVPIILVGNKRDLRS 123
Query: 532 DYSVIDNIWDIAEE--YPEVDRCI----------ECSAKSLINVSEMXLQCTKGS 660
D + + + +E PE R I ECSAK+ + E+ + T+ +
Sbjct: 124 DPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAA 178
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 53.2 bits (122), Expect = 2e-07
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI---TIPADVTPEQVPTNIIDIC 339
R ++++LG GVGK++L + V+ F E P E+ I D P + I+D
Sbjct: 2 REFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVL--EILDTA 59
Query: 340 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 519
EQ I+ +V+S+ Q+T + I VR E+ P++LVGNK
Sbjct: 60 GTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENV--PILLVGNK 117
Query: 520 IDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVS 630
DL + + +A ECSAK+ NV+
Sbjct: 118 CDLSHQRQVRSEEGLALAESWSCPFTECSAKNNQNVN 154
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP-ADVTPEQVPTNIIDICIPEQS 354
+++++G+ GVGK+SL + ++F ++ P E+ I ++ V +++D E+
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEF 78
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 534
+ I +VFSV +++ + + +R +Y PV+LV NK+DLI+
Sbjct: 79 SAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY--PVLLVANKVDLIN 136
Query: 535 YSVI 546
V+
Sbjct: 137 QRVV 140
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP-ADVTPEQVPTNIIDICIPEQS 354
+++++G+ GVGK+SL + ++F ++ P E+ I ++ V +++D E+
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEF 78
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 534
+ I +VFSV +++ + + +R +Y PV+LV NK+DLI+
Sbjct: 79 SAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY--PVLLVANKVDLIN 136
Query: 535 YSVI 546
V+
Sbjct: 137 QRVV 140
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 351
++LL+G+ GVGK+ L+L + +TE ++ + I ++ + + I D E+
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ AH I +V+ + QET N + WL + E+ K +LVGNK DL
Sbjct: 73 FRTITSSYYRGAHGIIVVYDITDQETFNNV-KQWLQEIDRYACENVNK--LLVGNKCDLT 129
Query: 532 DYSVIDNIWDIAEEYPEV--DRCIECSAKSLINVSEMXL 642
++ A++Y +E SAKS NV + L
Sbjct: 130 AKRAVET--QAAQDYAGQLGIPFLETSAKSSTNVEQAFL 166
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/136 (22%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKA-EEITIPADVTPEQVPTNIIDICIPEQ 351
++++++G+ GKTSL+++ ++F ++ + + + + N+ D +
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTA-GQG 63
Query: 352 SLEQV-AEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 528
+ EQ+ A+V + FS+ ++TL + W+P +R ++ P++LVG K DL
Sbjct: 64 NYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNV--PIMLVGTKNDL 121
Query: 529 IDYSVIDNIWDIAEEY 576
+D + D+ + E+Y
Sbjct: 122 VDDA--DSRNTVTEDY 135
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICI 342
RT RI++ G+ VGK+S ++ ++ +FT +P + +V V + D
Sbjct: 460 RTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAG 519
Query: 343 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKI 522
E+ RA +V+ V +++ ++ W+ ++++ P+ILVGNK+
Sbjct: 520 QERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRD-WIETIKESTERSI--PIILVGNKV 576
Query: 523 DL 528
D+
Sbjct: 577 DM 578
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 48.0 bits (109), Expect = 6e-06
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +1
Query: 160 TVPRTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 339
T +T +I ++G+ G GK+SLI L+T E+ A+EI + + D+
Sbjct: 233 TSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAF---ADEIQDYENTVSICIGGVECDLV 289
Query: 340 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 519
E + H +V+S+D + + K A L +RD P P ++ GNK
Sbjct: 290 FFESDMSDPCWLTNEIHAFLVVYSIDSKSSW-KQAMVALEMIRDR-PGTRNLPTLVAGNK 347
Query: 520 IDL 528
IDL
Sbjct: 348 IDL 350
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 48.0 bits (109), Expect = 6e-06
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 354
+++++G GVGK++L L + +EF E+ P KA+ + E+ +I+D ++
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTA-GQED 77
Query: 355 LEQVAEEIERA--HVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 528
+ + R+ IC VFS+ E+ + +R D P++LVGNK D+
Sbjct: 78 YSAIRDNYYRSGEGFIC-VFSILDMESFEATNEFREQILRVK-NSDSSVPIVLVGNKGDM 135
Query: 529 IDYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEM 636
D V+ ++ + E C +E SAK NV ++
Sbjct: 136 RDQRVVSA--ELCRQRAEQWGCHYVETSAKRRENVDKV 171
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 351
++L++G+ GVGK+SL+L F+E ++ + I D+ ++V I D E+
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQER 71
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
+ H + +V+ V E+ + WL + +NC + +K +LVGNK +
Sbjct: 72 FRTITSTYYRGTHGVVVVYDVTNGESFGNVKR-WLQEIENNC-DSVQK--VLVGNKCE 125
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Frame = +1
Query: 172 TVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 351
T++IL++GE GVGK+SL+L V + F P +A I + VT + N + + I +
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDVFD---PEQAATIGVDFRVTSMAIDGNRVKLAIWDT 67
Query: 352 SLEQVAEEIERAH------VICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVG 513
+ ++ + ++ VIC V+ V + + K+ +W+ V C D ++V
Sbjct: 68 AGQERFRTLTPSYYRGAQGVIC-VYDVTSRSSFEKL-NHWMQEVDTYCTND-NIIKMMVA 124
Query: 514 NKIDL 528
NKID+
Sbjct: 125 NKIDM 129
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 351
+I+L+G PGVGK++L+ EF P E T V + V I D E+
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 528
+ A +V+ + + +T + WL +RD+ ED + LVGNK DL
Sbjct: 70 FRCGASSYYRGALGALLVYDISKHKTYESV-EQWLKVLRDHANEDI--VITLVGNKSDL 125
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 44.8 bits (101), Expect = 6e-05
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 351
+++LLGE VGK+SL+L V +F E+ A +T + + I D E+
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
A +V+ + QE+ K + R P + L GNK D+
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIV---MALAGNKADVA 137
Query: 532 DYSVIDNIWDIAEEYPEVDRCI--ECSAKSLINVSEMXLQCTK 654
+ ++ ++ A Y E + + E SAK+ +NV+++ + K
Sbjct: 138 NKRTVE--YEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAK 178
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 351
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADLE 135
Query: 532 DYSVIDNIWDIAEEYPE--VDRCIECSAKSLINVSE 633
+ + AEE +ECSAK NV E
Sbjct: 136 NERHVAR--HEAEELAHRLSIPYLECSAKIRKNVDE 169
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 351
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADLE 135
Query: 532 DYSVIDNIWDIAEEYPE--VDRCIECSAKSLINVSE 633
+ + AEE +ECSAK NV E
Sbjct: 136 NERHVAR--HEAEELAHRLSIPYLECSAKIRKNVDE 169
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 351
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADLE 135
Query: 532 DYSVIDNIWDIAEEYPE--VDRCIECSAKSLINVSE 633
+ + AEE +ECSAK NV E
Sbjct: 136 NERHVAR--HEAEELAHRLSIPYLECSAKIRKNVDE 169
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 44.4 bits (100), Expect = 8e-05
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 351
+ +++G+ GVGK+ L+ ++F P E T +V+ +++ I D E+
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
A +V+ + R+ T N +++ WL + + + L+GNK DL
Sbjct: 73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLADAKSLTNPN--TAIFLIGNKADLE 129
Query: 532 DYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMXLQCTK 654
D D ++ A+ + E + +ECSAK+ NV + L+ K
Sbjct: 130 DQR--DVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAK 170
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 44.4 bits (100), Expect = 8e-05
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI-TIPADVTPEQVPTNIIDICIPEQS 354
R+++LG VGKT++I + EF+ E++ + + +P +I+D
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDTNFNFPD 78
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 534
+ +++ I A +VFSVD + +++ W + + P+++VGNK D+ +
Sbjct: 79 MRRLS--IASASAFLLVFSVDDVTSFKEMSDIWQE-ICSRRSDLNELPIVVVGNKCDVEN 135
Query: 535 YSVIDNIWDIAEEYPEVD-RCIECSAKSLINVSEM 636
+ + D R IE SAK I ++++
Sbjct: 136 KKIYEETAKAFTNRLSSDVRYIEVSAKDNIRITDV 170
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L+LS T F E++ + + V + ++ D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
+ + + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 345
+ ++ +++G+ VGKT L+LS T F E++ + + V + ++ D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
+ + + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 526 L 528
L
Sbjct: 119 L 119
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 351
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 528
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADL 134
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 7/171 (4%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPE 348
+++++LG+ GVGKTSL+ V F+ A+ +T ++ V I D +
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTA-GQ 68
Query: 349 QSLEQVAEEIERAHVICIV-FSVDRQETLNKIATYWLPFVRDNCPED-YRKPVILVGNKI 522
+ + + R C++ F V + + ++ F+ P D P +L+GNK+
Sbjct: 69 ERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKV 128
Query: 523 DLIDYSVIDNIWDIAEEYPEVDRCI---ECSAKSLINVSEMXLQCTKGSSA 666
DL + + A+ + + I E SAK +NV L + + A
Sbjct: 129 DLESQRAVSS--KRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALA 177
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 3/160 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP-ADVTPEQVPTNIIDICIPEQS 354
+I++LG GVGK++L L V F E+ + V E I+D EQ
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAGTEQF 64
Query: 355 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 534
A +VFS+ T + + + E P+ILVGNK DL +
Sbjct: 65 TGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKE---VPMILVGNKSDLAE 121
Query: 535 YSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMXLQC 648
+D A + E + E SA+ NVSE+ +C
Sbjct: 122 TRQVDE--SEAHNFAEKLKIPYFETSARLNQNVSEVFEEC 159
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 39.1 bits (87), Expect = 0.003
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFT-EHVPP-KAEEITIPADVTPEQVPTNIIDICIPEQ 351
+I+LLGE VGK+SL+L V +F+ +H+ +A +V Q +I D E+
Sbjct: 14 KIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEK 73
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
++ + +VF + +++ K+ W+ ++ C + + +++VGNKIDL
Sbjct: 74 YHALGPIYYRGSNGVLLVFDITDRKSFEKVKN-WVLEIK-TCLGNTAE-ILIVGNKIDLE 130
Query: 532 DYSVIDNIWDIAEEYPEVDRCI--ECSAKSLINVSE 633
+ + AE Y E + + E SA+ + +S+
Sbjct: 131 EERQVTR--QDAEAYAESEGALYMETSAQDNVGISD 164
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPAD-------VTPEQVPTNI 327
RT +++++G VGKT L F EH E TI D + E + +
Sbjct: 99 RTFKVIIVGNAAVGKTCLSFRFCCGRFPEHT-----EATIGVDFRERSCVIENELLRVQL 153
Query: 328 IDICIPEQSLEQ-VAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 504
D E+ + VA + + V+ V +E+ N +A + + D P I
Sbjct: 154 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRI 213
Query: 505 LVGNKIDL 528
L+GNK D+
Sbjct: 214 LIGNKCDV 221
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPA-DVTPEQVPTNIIDICIPEQ 351
++LL+G+ GVGKT ++ + F T + + I ++ +++ I D E+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
A I +V+ + ++ + IA WL + ++ ED K +++GNK D+
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHASEDVVK--MILGNKCDMS 127
Query: 532 DYSVI 546
D V+
Sbjct: 128 DRRVV 132
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.004
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 351
+++L+G+ GVGK++L+ EF E T V + V I D E+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ A +V+ + + T + WL +RD+ D ++LVGNK DL
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVER-WLKELRDHA--DQNIVIMLVGNKSDLR 129
Query: 532 DYSVIDNIWDIAEEYPEVDRC--IECSAKSLINV 627
+ D A+ Y E ++ IE SA NV
Sbjct: 130 HLRAVPT--DEAKIYAERNQLSFIETSALDSTNV 161
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.005
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF--TEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 351
+++ LGE VGKTS+I + + F T + ++ + + + D E+
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 72
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ I + V +V+ + + ++ T W+ VR+ D ++LVGNK DL
Sbjct: 73 FRSLIPSYIRDSSVAVVVYDITNANSFHQ-TTKWVDDVRNERGCDV--IIVLVGNKTDLA 129
Query: 532 DYSVIDNIWDIAEEYPEVD-RCIECSAKSLINVSEM 636
D + + D ++ +++ IE SAK+ NV ++
Sbjct: 130 DKRQV-STEDGEKKARDLNVMFIETSAKAGYNVKQL 164
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 37.9 bits (84), Expect = 0.007
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 351
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
A I +V+ + + + I W+ + ++ D + +++GNK D+
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVER--MIIGNKCDIE 126
Query: 532 DYSVI--DNIWDIAEEYPEVDRCIECSAKSLINVSE 633
+ + D +A EY + +E SAK+ +N+ E
Sbjct: 127 ERREVSRDRGEQLAIEYG--TKFLETSAKANLNIDE 160
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 37.9 bits (84), Expect = 0.007
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 351
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
A I +V+ + + + I W+ + ++ D + +++GNK D+
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVER--MIIGNKCDIE 126
Query: 532 DYSVI--DNIWDIAEEYPEVDRCIECSAKSLINVSE 633
+ + D +A EY + +E SAK+ +N+ E
Sbjct: 127 ERREVSRDRGEQLAIEYG--TKFLETSAKANLNIDE 160
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.009
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF--TEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 351
+++ LGE VGKTSLI + + F T + ++ + V + D E+
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 71
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 531
+ I + V +V+ + + ++ + W+ VR D ++LVGNK DL
Sbjct: 72 FRSLIPSYIRDSTVAVVVYDITNSNSFHQ-TSKWIDDVRTERGSDV--IIMLVGNKTDLS 128
Query: 532 DYSVIDNIWDIAE-EYPEVD-RCIECSAKSLINVSEM 636
D + D E + E++ IE SAK+ NV ++
Sbjct: 129 DKRQVTT--DEGERKAKELNVMFIETSAKAGYNVKQL 163
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 37.1 bits (82), Expect = 0.012
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTP----EQVPTNIIDI 336
+TV+++++GE G GKT+L+ + F E P I + + + + D
Sbjct: 5 KTVKVVVVGESGAGKTALLTCFLDNTF-ETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDT 63
Query: 337 CIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGN 516
E+ + I A V +V + + + + W + D D+ I+VGN
Sbjct: 64 AGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIR-WKGII-DKNKSDFTS-TIIVGN 120
Query: 517 KIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEM 636
K DL+ + I E D IE SAK N+ ++
Sbjct: 121 KHDLVSEKRSPRLTAIIRE--TNDEYIETSAKMRKNIKKL 158
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.036
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK-----AEEITIPADVTPEQVPTNIIDICI 342
++L++G+PGVGKTS+I V F+ + A +I +P D V I DI
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKI-LPVDEN-TVVHLQIWDISG 70
Query: 343 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFV--RDNCPEDYRKPVILVGN 516
++ + AH IV R+ T+ A W + + + P IL+ N
Sbjct: 71 QDRYGVMTRVYYKDAHAAIIVLDSTRERTIEG-ALRWKTDLDQKVTLADGSPVPAILLAN 129
Query: 517 KIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSE 633
K D+ + D ++D+ V SAK + + E
Sbjct: 130 KCDIDNKLGDDKLYDLETNNGFVG-SFRTSAKESVGIEE 167
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.036
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK-----AEEITIPADVTPEQVPTNIIDICI 342
++L++G+PGVGKTS+I V F+ + A +I +P D V I DI
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKI-LPVDEN-TVVHLQIWDISG 70
Query: 343 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFV--RDNCPEDYRKPVILVGN 516
++ + AH IV R+ T+ A W + + + P IL+ N
Sbjct: 71 QDRYGVMTRVYYKDAHAAIIVLDSTRERTIEG-ALRWKTDLDQKVTLADGSPVPAILLAN 129
Query: 517 KIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSE 633
K D+ + D ++D+ V SAK + + E
Sbjct: 130 KCDIDNKLGDDKLYDLETNNGFVG-SFRTSAKESVGIEE 167
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 34.3 bits (75), Expect = 0.083
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKA----EEITIPADVTPEQVPTNIIDICIP 345
+++L+G+ GVGK++L+ EF H+ K+ E T V + V I D
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEF--HLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E+ + A +V+ + + T + WL +RD+ D ++ VGNK D
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVER-WLKELRDHA--DQNIVIMPVGNKCD 127
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 33.5 bits (73), Expect = 0.14
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Frame = +1
Query: 160 TVPR-TVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI-------TIPADVTPEQ- 312
T P+ ++++LG+ GVGKTS+I + H P I + AD +
Sbjct: 47 TAPKHKAKVVVLGDSGVGKTSII---YRHRYGAHYRPVNATIGASFVSFDVGADYRDRED 103
Query: 313 -VPTNIIDICIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDY 489
V + D E+ V + A IV+ V + T + + R + ED
Sbjct: 104 VVRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDA 163
Query: 490 RKPVILVGNKIDLID 534
V L+GNK DL++
Sbjct: 164 N--VYLIGNKTDLVE 176
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 33.1 bits (72), Expect = 0.19
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPA-DVTPEQVPTNIIDICIPEQ 351
++LL+G+ GVGKT ++ + F T + + I ++ +++ I D E+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 519
A I +V+ + ++ + IA WL + ++ ED K +++GNK
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHASEDVVK--MILGNK 123
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.33
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPE 348
R +RILLLG GKT+++ L +E+ +HV P + + + N+ DI
Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSED-VQHVTP-TKGFNVKTVAAMGDIRLNVWDIGGQR 73
Query: 349 QSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRK-PVILVGNKID 525
+ E + V + ++ +++ L + D E RK PV++ NK D
Sbjct: 74 SIRPYWSNYYENIDTLIFVIDSNDKKRFDEM-NIELGELLDE--EKLRKVPVLIFANKQD 130
Query: 526 LI 531
L+
Sbjct: 131 LV 132
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 31.9 bits (69), Expect = 0.44
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = +1
Query: 172 TVRILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEI-TIPADVTPEQVPTNIIDICIP 345
T +++L+G+ G GKT+ + +T EF + +V E+ + Q+ N+ D
Sbjct: 9 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQ 68
Query: 346 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 525
E+ + I+F V + T + + RD P++L GNK+D
Sbjct: 69 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWH----RDLARVCENIPIVLCGNKVD 124
Query: 526 LIDYSV 543
+ D V
Sbjct: 125 VKDRKV 130
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 425 SCL-STENTMHITCALSISSATCSKDCSGIQISIILVGTCSGVTSAGIVISSAFGGTCSV 249
SC+ ST N+ I C S S CS + QI++I G T+ G SSA G TC +
Sbjct: 161 SCMQSTLNSAFICCRSSSSQRICSNN----QIALITNGALEMCTTPGTQCSSA-GYTCQL 215
Query: 248 N 246
+
Sbjct: 216 S 216
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEH 258
++L++G+ GVGK+SL+L F+E+
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSEN 38
>AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical
protein F37B4.14 protein.
Length = 143
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 396 YYMCPFYLFSN-LFQRLFRNTNINNIGWNLFWRYISRYSYFFS 271
+Y+ P LFSN ++ + + NN+GWN+ ++FFS
Sbjct: 30 HYINPILLFSNNSYEHHHLSRSSNNVGWNILAILKLHITFFFS 72
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 157 ETVPRTVRILLLGE---PGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNI 327
E +P V+ILL E P V K S L ++ + P+ ++ + V PE VP +
Sbjct: 64 EPIPELVQILLAAEPNKPSVPKRSNRKKLTYKQPPRNSTPQVPKVAVTLPV-PEPVPEPV 122
Query: 328 IDICIPEQSLEQVAEEI 378
+ +PE + E ++E +
Sbjct: 123 PE-PVPESTPEPISEPL 138
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTE 255
++LL+G+ GVGK+ L+L + +TE
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTE 38
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 408 KYYAYYMCPFYLFSNLFQRLFRNTNINNIGWNLFWRYISRYSYFFSFW 265
+Y+ ++ F FSNL + F+NT + F+ S S FF+ W
Sbjct: 63 QYFKFFNEKFQFFSNLSNKKFKNTGKKPV----FFSNFSNKSIFFAVW 106
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 169 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 264
R +RIL+LG G GKT+++ L E +P
Sbjct: 15 REMRILILGLDGAGKTTILYRLQVGEVVTTIP 46
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 351
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 352 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 519
A I +V+ + + + I W+ + ++ D + +++GNK
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVER--MIIGNK 122
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 499 VILVGNKIDLIDYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEM 636
+IL+GNKIDL +V+ + +V +C +E SA+ +N+SE+
Sbjct: 280 IILIGNKIDLKRNTVVSKMEGAC--LAKVHKCNFVEVSAQYSMNISEL 325
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 145 KMVYETVPRTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 264
KM+ E +L+ GEPG GKT++ ++ +++E E P
Sbjct: 57 KMIQEGKIAGRALLVTGEPGAGKTAIAIA-ISKELGEDTP 95
>Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical
protein JC8.7 protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 460 FVRDNCPEDYRKPVILVGNKIDLIDYSVIDNI--WDIAEEYPEVDRCIECSAKS 615
F RD P D +KPVI+ + + D SV+ N I + +CI+CSAKS
Sbjct: 113 FWRDK-PND-KKPVIVFMDLKTIPDLSVVGNEIRHAILDFCTRCSKCIDCSAKS 164
>Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical
protein F41D3.4 protein.
Length = 669
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -1
Query: 238 SLTIK*VMFYQLLARLEEVYVRFEVQFHKPFCSFILETSYVYYLFS*AVV 89
SL+++ V FY L+ + + + + H P+ + I SY+++ FS A V
Sbjct: 142 SLSVE-VQFYVLVPSMYLIGTKLPAKLHNPYYTIIGLASYLFFHFSPAPV 190
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 184 LLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP 291
L++GE GVGK+SL+L V + P +A I +P
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVD---PERAVSIGVP 33
>U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical
protein ZK546.5 protein.
Length = 646
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 256 HVPPKAEEITIPADVTPEQVPTNIIDICIPEQSLEQVAEE 375
H+P + EE+ + + P +P+ IP++ + AE+
Sbjct: 455 HIPTQHEEVVVESSEDPNDIPST-SQAMIPDEDANEAAEQ 493
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 490 RKPVILVGNKIDLIDYSVIDNIWDIAE 570
RKPVI V NKID +D + NI +A+
Sbjct: 293 RKPVICVLNKIDALDENEKTNISSLAK 319
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 27.9 bits (59), Expect = 7.2
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 5/161 (3%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLIL-----SLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 339
++++LLG+ GKT L++ + + F V I + ++V I D
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLI--TMGDKKVKLQIWDTA 60
Query: 340 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 519
E+ A + +V+ + + + WL +++ E + V LVGNK
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENCRN-WLSQIKEYGKEAVQ--VTLVGNK 117
Query: 520 IDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMXL 642
DL D +AE Y ++ +E SAK+ NV L
Sbjct: 118 CDLPRAVPTDEGKRLAEAY-QIP-FMETSAKTGFNVDRAFL 156
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 27.9 bits (59), Expect = 7.2
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 5/161 (3%)
Frame = +1
Query: 175 VRILLLGEPGVGKTSLIL-----SLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 339
++++LLG+ GKT L++ + + F V I + ++V I D
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLI--TMGDKKVKLQIWDTA 60
Query: 340 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 519
E+ A + +V+ + + + WL +++ E + V LVGNK
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENCRN-WLSQIKEYGKEAVQ--VTLVGNK 117
Query: 520 IDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMXL 642
DL D +AE Y ++ +E SAK+ NV L
Sbjct: 118 CDLPRAVPTDEGKRLAEAY-QIP-FMETSAKTGFNVDRAFL 156
>U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform c protein.
Length = 544
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 558 GYSRRISRGGQMYRMFCEISNKCIRNXFTMHKRQFC 665
G+ RR G YR C SN CI + F + ++C
Sbjct: 65 GFFRRTLTG--KYRYACRFSNNCIVDKFQRNSCRYC 98
>U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform a protein.
Length = 583
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 558 GYSRRISRGGQMYRMFCEISNKCIRNXFTMHKRQFC 665
G+ RR G YR C SN CI + F + ++C
Sbjct: 104 GFFRRTLTG--KYRYACRFSNNCIVDKFQRNSCRYC 137
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITI 288
R+ + G PGVGK+S I +L E TE+ K +TI
Sbjct: 25 RVGISGSPGVGKSSFIEAL-GAELTENRGKKVAVLTI 60
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITI 288
R+ + G PGVGK+S I +L E TE+ K +TI
Sbjct: 126 RVGISGSPGVGKSSFIEAL-GAELTENRGKKVAVLTI 161
>AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 565
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 558 GYSRRISRGGQMYRMFCEISNKCIRNXFTMHKRQFC 665
G+ RR G YR C SN CI + F + ++C
Sbjct: 86 GFFRRTLTG--KYRYACRFSNNCIVDKFQRNSCRYC 119
>AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 595
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 558 GYSRRISRGGQMYRMFCEISNKCIRNXFTMHKRQFC 665
G+ RR G YR C SN CI + F + ++C
Sbjct: 116 GFFRRTLTG--KYRYACRFSNNCIVDKFQRNSCRYC 149
>AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 583
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 558 GYSRRISRGGQMYRMFCEISNKCIRNXFTMHKRQFC 665
G+ RR G YR C SN CI + F + ++C
Sbjct: 104 GFFRRTLTG--KYRYACRFSNNCIVDKFQRNSCRYC 137
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 163 VPRTVRILLLGEPGVGKTSLI 225
+PR +L+ G+ G+GKTSL+
Sbjct: 404 LPRNKTLLITGDSGIGKTSLM 424
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 163 VPRTVRILLLGEPGVGKTSLI 225
+PR +L+ G+ G+GKTSL+
Sbjct: 432 LPRNKTLLITGDSGIGKTSLM 452
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 163 VPRTVRILLLGEPGVGKTSLI 225
+PR +L+ G+ G+GKTSL+
Sbjct: 404 LPRNKTLLITGDSGIGKTSLM 424
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 178 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP 291
R LLL G G +S+ + L+T EH A I +P
Sbjct: 6 RFLLLSFLGTGVSSIRIGLITSHHLEHSVRTAVNIIVP 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,394,093
Number of Sequences: 27780
Number of extensions: 296364
Number of successful extensions: 1267
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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