Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29o17
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070561-1|AAL48032.1|  538|Drosophila melanogaster LD37523p pro...    28   8.5  
AY060697-1|AAL28245.2|  274|Drosophila melanogaster GH13929p pro...    28   8.5  
AE014297-149|AAF52095.1|  538|Drosophila melanogaster CG2503-PA ...    28   8.5  
AE014134-87|AAF51509.1|  271|Drosophila melanogaster CG11912-PA ...    28   8.5  

>AY070561-1|AAL48032.1|  538|Drosophila melanogaster LD37523p
           protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 238 EERLKAVVQYLVKSKAVAAAHSYCTQCTSGNQKNDSKSNYVPVIMMPIYP 387
           ++ L+    YL +   + A     +   S   K+ SK N VPV ++PI+P
Sbjct: 160 KKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFP 209


>AY060697-1|AAL28245.2|  274|Drosophila melanogaster GH13929p
           protein.
          Length = 274

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 148 GFDALNMTAPFMVQMNPDGKWNSCKPENLDEERLKAVVQYLV--KSKAVAAAHSYCTQ 315
           G++A    AP++V +      + C    LDE  +      L   + +AVA AHS   Q
Sbjct: 36  GYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVTIVTAAHCLTYNQGQAVAGAHSRTDQ 93


>AE014297-149|AAF52095.1|  538|Drosophila melanogaster CG2503-PA
           protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 238 EERLKAVVQYLVKSKAVAAAHSYCTQCTSGNQKNDSKSNYVPVIMMPIYP 387
           ++ L+    YL +   + A     +   S   K+ SK N VPV ++PI+P
Sbjct: 160 KKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFP 209


>AE014134-87|AAF51509.1|  271|Drosophila melanogaster CG11912-PA
           protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 148 GFDALNMTAPFMVQMNPDGKWNSCKPENLDEERLKAVVQYLV--KSKAVAAAHSYCTQ 315
           G++A    AP++V +      + C    LDE  +      L   + +AVA AHS   Q
Sbjct: 33  GYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVTIVTAAHCLTYNQGQAVAGAHSRTDQ 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,880,112
Number of Sequences: 53049
Number of extensions: 340418
Number of successful extensions: 1269
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)