Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29o12
         (461 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039048-1|AAB94237.2|  480|Caenorhabditis elegans Cell division...    29   1.6  
Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81557-7|CAB04538.1|  421|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    28   2.8  
U29382-1|AAG00006.1|  382|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z29117-9|CAA82381.1|  182|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AF016452-13|AAB66010.1|  303|Caenorhabditis elegans Hypothetical...    28   3.7  
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p...    27   4.9  
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p...    27   4.9  
AF078787-2|AAC26950.1|  407|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U40415-9|AAK39249.3|  281|Caenorhabditis elegans Hypothetical pr...    27   6.5  

>AF039048-1|AAB94237.2|  480|Caenorhabditis elegans Cell division
           cycle related protein25.2 protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 154 LLQPEKLKIHKWERSQTHWHRKPNIDSLFLLDDDD 258
           LLQ  K K  K E+S  H+H +P   S+  +DDD+
Sbjct: 125 LLQQRKRKFEKSEQSSDHFHLEPM--SVEAMDDDE 157


>Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC455.11 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 277 LCPVRSHHHHLAKIRNLYWVFYANAFENVPIYVFLIFLAVANN 149
           L  + S    LA    +Y+  Y     N PIY+FLI  ++  N
Sbjct: 100 LAAIISVERTLATTTPIYFYNYRKTISNFPIYIFLITTSIVCN 142


>Z81557-7|CAB04538.1|  421|Caenorhabditis elegans Hypothetical
           protein F59A1.13 protein.
          Length = 421

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = -2

Query: 265 RSHHHHLAKIRNLYWVFYANAFENVPIYVFLIFLAVANNLAPNYSHLLI 119
           R H H    + +L    YAN F   PI V ++  A A N A N+SHL I
Sbjct: 343 RQHTHFALTVSSLG--IYANYF-GAPIVVGILTSA-AGNTAENWSHLFI 387


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +1

Query: 157 LQPEKLKIHKWERSQTHWHRKPNID--SLFLLDDDDENEPDTTLEVIMLKKIRW 312
           L P K    + +     W  + NI+  S    DD DENEP + ++    K   W
Sbjct: 262 LTPPKQIFDETDLKPVDWDERENIEDESAVKPDDWDENEPQSVVDEAATKPYDW 315


>U29382-1|AAG00006.1|  382|Caenorhabditis elegans Hypothetical
           protein R03H10.2 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 241 KIRNLYWVFYANA--FENVPIYVFLIFLAVANNLAPNYSHLLI*EELKH 101
           K R ++W+  A    +  VPI+VF   L   +N+ PN +  ++   + H
Sbjct: 147 KARVVFWLVLATGILYAVVPIHVFTFVLMPYSNMLPNATEKILNHAIPH 195


>Z29117-9|CAA82381.1|  182|Caenorhabditis elegans Hypothetical
           protein C48B4.9 protein.
          Length = 182

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 232 NLYWVFYANAFENVPIYVFLIFLAVANNLAPNYSHLLI 119
           NL W  + ++FEN  I++ +I LAVA        HLLI
Sbjct: 111 NLKWD-HTSSFENYLIFILVILLAVALGSYTWLCHLLI 147


>AF016452-13|AAB66010.1|  303|Caenorhabditis elegans Hypothetical
           protein T05H4.4 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 137 LFTSSNIGGIETSENSSLVSCDI-IGYY*INSEQYKKNT 24
           ++ S+NIGG     + + VSCD+ +GY  +  + Y KNT
Sbjct: 81  VYLSANIGGKLIVRSYTPVSCDLDLGYVDLMVKVYFKNT 119


>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
            protein T05C12.10 protein.
          Length = 1169

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 142  VQDYLLQPEKLKIHKWERSQTHWHRKPNIDSLFLL 246
            + DY+L P    + K+E+ +  +HR+P   + F++
Sbjct: 982  IGDYVLVPSSGNVLKYEKVEMFYHREPKTRTNFVV 1016


>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
            protein T05C12.10 protein.
          Length = 1169

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 142  VQDYLLQPEKLKIHKWERSQTHWHRKPNIDSLFLL 246
            + DY+L P    + K+E+ +  +HR+P   + F++
Sbjct: 982  IGDYVLVPSSGNVLKYEKVEMFYHREPKTRTNFVV 1016


>AF078787-2|AAC26950.1|  407|Caenorhabditis elegans Hypothetical
           protein T17A3.3 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 446 CKILIKNYFSGKATLGRSYLVNYQR 372
           CK+ I + F   + L RS LVNY R
Sbjct: 158 CKLFISSNFMQNSKLHRSLLVNYSR 182


>Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical
           protein T22H2.6b protein.
          Length = 345

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 181 HKWERSQTHWHRKPNIDSLFLLDDDDENEPDTTLE 285
           H  + + T  HRKP ++ L   ++DD++E  T+ E
Sbjct: 238 HLRKFASTSIHRKPAVEFLSEEEEDDDDEESTSSE 272


>Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical
           protein T22H2.6a protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 181 HKWERSQTHWHRKPNIDSLFLLDDDDENEPDTTLE 285
           H  + + T  HRKP ++ L   ++DD++E  T+ E
Sbjct: 238 HLRKFASTSIHRKPAVEFLSEEEEDDDDEESTSSE 272


>U40415-9|AAK39249.3|  281|Caenorhabditis elegans Hypothetical
           protein K02G10.1 protein.
          Length = 281

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 196 SQTHWHRKPNIDSLFLLDDDDENEPD 273
           S T+WHRK  +  L +  +D+E +P+
Sbjct: 81  SVTYWHRKSCVADLRVYAEDNEAQPE 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,299,072
Number of Sequences: 27780
Number of extensions: 183443
Number of successful extensions: 503
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)