Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29o08
         (334 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CD09F Cluster: hypothetical protein TTHERM_0019...    35   0.41 
UniRef50_A5DNB2 Cluster: Putative uncharacterized protein; n=1; ...    34   0.55 
UniRef50_Q7QIZ4 Cluster: ENSANGP00000007545; n=4; Culicidae|Rep:...    32   2.2  
UniRef50_Q245R2 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_A4VDN4 Cluster: Putative uncharacterized protein; n=2; ...    31   3.9  
UniRef50_Q7RLB9 Cluster: Elongation factor Tu family, putative; ...    31   5.1  
UniRef50_UPI00015A4B10 Cluster: UPI00015A4B10 related cluster; n...    31   6.7  
UniRef50_Q4U8D1 Cluster: Theileria-specific sub-telomeric protei...    31   6.7  
UniRef50_Q73C83 Cluster: Conserved hypothetical integral membran...    30   8.9  
UniRef50_A2FWZ8 Cluster: HNH endonuclease domain protein, putati...    30   8.9  

>UniRef50_UPI00006CD09F Cluster: hypothetical protein TTHERM_00191870;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00191870 - Tetrahymena thermophila SB210
          Length = 986

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +2

Query: 170  TFWHEGRKFSDKTCNIEALDFSLNSEDYIVLGNIH*NRKMLDKRIKMKQ 316
            +F +  RKF  K  ++  LD   N++++ VL  I  N  MLD+ +K KQ
Sbjct: 934  SFNNAARKFMKKNSSLNNLDSVQNNDNFQVLKQIELNLTMLDEELKEKQ 982


>UniRef50_A5DNB2 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 359

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 152 LFTHQKTFWHEGRKFSDKTCNIEALDFSLNSEDYIVLGN 268
           LFT Q+TFW +  +     C+ E L FSL    Y ++G+
Sbjct: 40  LFTPQRTFWSQPWRLITAFCHFEGLSFSLLVRVYYMMGS 78


>UniRef50_Q7QIZ4 Cluster: ENSANGP00000007545; n=4; Culicidae|Rep:
            ENSANGP00000007545 - Anopheles gambiae str. PEST
          Length = 1729

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = -2

Query: 258  TI*SSEFRLKSSASILQVLSENFLPSC----QNVF*CVNNYFGKWILVKIFY*NCLLQFH 91
            T+ ++   L +  +I+Q L     P C     N+F    NYF   +LVK+    CL++ H
Sbjct: 1091 TVANNSEDLVAYINIVQCLGAKMKPKCLPIGPNLF---ENYFD--VLVKLASARCLIENH 1145

Query: 90   FFCNGNTQKTDYIL-NCLFIGH 28
            F  N N      I+ NCL + H
Sbjct: 1146 FSTNYNELNDRKIIGNCLIVLH 1167


>UniRef50_Q245R2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1767

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 84  KKNGIVINNSNKIF*PKSISRNNYLHIKKRFGMKE-ENFQ 200
           K   ++ NNSNK   P    +NN  HI K+  +KE  NFQ
Sbjct: 877 KATSLIQNNSNKNQNPVQSLQNNQKHIAKKLSLKETTNFQ 916


>UniRef50_A4VDN4 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 715

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +3

Query: 39  IDNLKYNLFFAYFHCKKNGIVINNSNKIF*PKSISRNNYLHIKKRFGMKEENF 197
           ++ +K N  + YF+ +K  I IN+SNK     S +  N L +K + G ++ N+
Sbjct: 1   MNQMKINSLYIYFYYQKTQIKINSSNKF----SGNNLNILELKSKKGNQQINY 49


>UniRef50_Q7RLB9 Cluster: Elongation factor Tu family, putative;
           n=5; Plasmodium (Vinckeia)|Rep: Elongation factor Tu
           family, putative - Plasmodium yoelii yoelii
          Length = 1308

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 66  FAYFHCKKNGIVINNSNKIF*PKSISRNNYLHIKKRFGMKEEN 194
           F Y  CKK  I INN NKI   K +    Y +IK++  +K  N
Sbjct: 286 FTYLFCKKMNIDINNCNKI--KKYMWNRYYFNIKEKKILKIPN 326


>UniRef50_UPI00015A4B10 Cluster: UPI00015A4B10 related cluster; n=3;
           Danio rerio|Rep: UPI00015A4B10 UniRef100 entry - Danio
           rerio
          Length = 1282

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -3

Query: 206 FCLKIFFLHAK---TFFDV*IIISGNGFWLKYFIRIVYYNSIFFAMEIRKKQII 54
           F LK FF++ K    F     + S N  WL +F+ + ++  IF   +  KKQ +
Sbjct: 353 FFLKSFFVNNKFFVLFLSSSFVKSVNKLWLIFFLSLCFWGQIFNKHDTLKKQFV 406


>UniRef50_Q4U8D1 Cluster: Theileria-specific sub-telomeric protein,
           SVSP family member, putative; n=1; Theileria
           annulata|Rep: Theileria-specific sub-telomeric protein,
           SVSP family member, putative - Theileria annulata
          Length = 602

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 192 FLPSCQNVF*CVNNYFGKWILVKIFY*NCLLQFHFFCNGN 73
           F+  C NVF  +  Y GKWI+++    + +  F    +GN
Sbjct: 472 FVIECDNVFTLIKQYKGKWIMIESLAPDYIKIFKISSSGN 511


>UniRef50_Q73C83 Cluster: Conserved hypothetical integral membrane
           protein, putative; n=2; Bacillus cereus group|Rep:
           Conserved hypothetical integral membrane protein,
           putative - Bacillus cereus (strain ATCC 10987)
          Length = 225

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 TFFDV*IIISGNGFWLKYFIRIVYYN-SIFFAMEIRKKQIIF*IVYLSAILNL 18
           TFF    I + +G    +F  I Y N  IFF ++I  KQ    I+Y S +L L
Sbjct: 81  TFFTTFGISTVSGIVALFFAPIFYKNIMIFFGVDINYKQTFPIIIYASFVLRL 133


>UniRef50_A2FWZ8 Cluster: HNH endonuclease domain protein, putative;
           n=1; Trichomonas vaginalis G3|Rep: HNH endonuclease
           domain protein, putative - Trichomonas vaginalis G3
          Length = 249

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +3

Query: 87  KNGIVINNSNKIF*PKSISRNNYLHIKKRFGMKEENF 197
           +N  +I  SN+IF   ++++N+YL +K   G +++NF
Sbjct: 30  QNFEIIYCSNRIFTDTTVNQNSYLSVKVPTGYEKDNF 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,719,704
Number of Sequences: 1657284
Number of extensions: 5167999
Number of successful extensions: 10938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10938
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)