Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29o08
(334 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.18
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 2.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 3.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 3.9
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 5.2
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 20 6.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 6.8
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 20 6.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 6.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 6.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 9.1
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.18
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 48 LKYNLFFAYFHCKKNGIVINNS-NKIF*PKSISRNNYLHIKKRFGMKEE 191
L+Y L+ Y H + +V+ S K P+S R+N + K F + ++
Sbjct: 62 LEYELYIKYSHTHEKKLVLERSKTKSKSPESRDRSNTSNTSKTFILSDK 110
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 2.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 152 IISGNGFWLKYFIRIVYYNSI 90
++ G L YFI +Y++SI
Sbjct: 444 VLGVQGALLSYFIEPIYFHSI 464
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.0 bits (42), Expect = 3.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 143 GNGFWLKYFIRIVYYNSIFFAMEIRKKQII 54
G F + YF+ +V F ME+ Q++
Sbjct: 16 GGAFLIPYFLTLVLAGIPMFFMELALGQML 45
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 3.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 72 YFHCKKNGIVINNSNKIF 125
YF+ K NG +NS+ +F
Sbjct: 142 YFYSKSNGSNSSNSDVLF 159
Score = 21.0 bits (42), Expect = 3.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 109 LFITIPFFLQWKYAKN 62
+FI I FL+ KY KN
Sbjct: 339 MFINILKFLKQKYVKN 354
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 20.6 bits (41), Expect = 5.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 84 KKNGIVINNSNKIF*PKSISRNNYLHIKK 170
K I++ + I P+SI+RN IKK
Sbjct: 572 KTYNIILKGIDAIEFPRSITRNATALIKK 600
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 20.2 bits (40), Expect = 6.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 48 NCLFIGHSESHC 13
NCL +G + HC
Sbjct: 63 NCLSLGKAGGHC 74
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 6.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 84 KKNGIVINNSNKIF*PKSISR 146
K GI+ N +NK PKS SR
Sbjct: 804 KPIGILWNMNNKRLDPKSDSR 824
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 20.2 bits (40), Expect = 6.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 48 NCLFIGHSESHC 13
NCL +G + HC
Sbjct: 63 NCLSLGKAGGHC 74
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.2 bits (40), Expect = 6.8
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 143 GNGFWLKYFIRIVYYNSIFFAMEIRKKQII 54
G F + YFI + F ME+ Q++
Sbjct: 54 GGAFMVPYFIALALAGVPMFLMELSLGQMM 83
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.2 bits (40), Expect = 6.8
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 143 GNGFWLKYFIRIVYYNSIFFAMEIRKKQII 54
G F + YFI + F ME+ Q++
Sbjct: 107 GGAFMVPYFIALALAGVPMFLMELSLGQMM 136
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.8 bits (39), Expect = 9.1
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 36 IGHSESHCHGT 4
+GH SH H T
Sbjct: 419 MGHGHSHIHAT 429
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,456
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7466580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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