Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29o06
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate... 147 3e-35
U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphata... 147 3e-35
U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine nucleotidohy... 147 3e-35
M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase prot... 147 3e-35
L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase ... 147 3e-35
CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein. 147 3e-35
CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein. 147 3e-35
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 147 3e-35
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 147 3e-35
BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase pr... 147 3e-35
AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase pr... 147 3e-35
AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein. 147 3e-35
AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein. 147 3e-35
AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase pr... 147 3e-35
AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein. 75 3e-13
AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein. 41 0.004
DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein. 36 0.096
AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens ... 36 0.13
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 36 0.13
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 36 0.13
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 36 0.13
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 36 0.13
AF074086-6|AAD21096.1| 333|Homo sapiens protease protein. 36 0.13
AF074086-2|AAF88166.1| 333|Homo sapiens protease protein. 36 0.13
U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate... 36 0.17
U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate... 36 0.17
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 35 0.29
>U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase precursor protein.
Length = 252
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 203
>U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphatase
protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine
nucleotidohydrolase protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase
protein.
Length = 141
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 63 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 92
>L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase
protein.
Length = 141
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 63 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 92
>CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 203
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 203
>BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein.
Length = 252
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 203
>AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 147 bits (356), Expect = 3e-35
Identities = 69/90 (76%), Positives = 76/90 (84%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 559 SGLALKNFIDVGAGVIDEDYRGNVGVVLFN 648
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFN 115
>AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein.
Length = 73
Score = 74.5 bits (175), Expect = 3e-13
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 558
L+F SE A +GS +A G DL AYD T+P K L K D+QI LP GCY RVAP
Sbjct: 3 LRFAPFSEQATTLTQGSTQATGYDLNGAYDDTIPPMEKALGKMDIQIALPSGCYRRVAPW 62
Query: 559 SGLALKNFID 588
GLA K+FID
Sbjct: 63 FGLAAKHFID 72
>AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein.
Length = 225
Score = 40.7 bits (91), Expect = 0.004
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +1
Query: 415 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 594
P+ + ++AG++++ +P G + + ++ LP G +G + P S A K + V
Sbjct: 76 PLPATLRSAGLEVLVPEGGMLPP-GDTTISLNWKLRLPTGHFGLLLPLSQQAKKG-VAVL 133
Query: 595 AGVIDEDYRGNVGVVLFNHS 654
AGVID DY+ + ++L N S
Sbjct: 134 AGVIDLDYQDEISLLLHNRS 153
>DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein.
Length = 273
Score = 36.3 bits (80), Expect = 0.096
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 436 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
+A +DL + ++ P + + T + LP G + RS L LK + + GV+D
Sbjct: 3 SAAVDLCTIQAVSLLPGEPPQKIPTGVYGPLPERTVGLILGRSSLNLKG-VQIHTGVVDS 61
Query: 613 DYRGNVGVVL 642
DY+G + +V+
Sbjct: 62 DYKGEIQLVI 71
>AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ27501 fis, clone TST06374. ).
Length = 134
Score = 35.9 bits (79), Expect = 0.13
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +1
Query: 415 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 594
PV + +AG++++ +P + +L++ LPPG +G + P S A K + V
Sbjct: 14 PVPATLLSAGLEVLVPDGGRLPPGDTTTIPLNLKLRLPPGYFGLLLPLSQQAKKG-VTVL 72
Query: 595 AGVIDEDYRGNVGVVLFN 648
AG+I DY + + L N
Sbjct: 73 AGMI--DYHDEISLPLHN 88
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 475 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVL 642
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI 732
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 475 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVL 642
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI 732
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 475 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVL 642
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+
Sbjct: 678 LPGEPPQKIPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI 732
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 475 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVL 642
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI 732
>AF074086-6|AAD21096.1| 333|Homo sapiens protease protein.
Length = 333
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 436 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 613 DYRGNVGVVL 642
DY+G + +V+
Sbjct: 121 DYKGEIQLVI 130
>AF074086-2|AAF88166.1| 333|Homo sapiens protease protein.
Length = 333
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 436 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 613 DYRGNVGVVL 642
DY+G + +V+
Sbjct: 121 DYKGEIQLVI 130
>U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, nuclear isoform protein.
Length = 51
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDL 453
L+F RLSE+A P RGS +AAG DL
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDL 50
>U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, mitochondrial isoform protein.
Length = 139
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 379 LKFTRLSENAFQPVRGSEKAAGIDL 453
L+F RLSE+A P RGS +AAG DL
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDL 138
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 34.7 bits (76), Expect = 0.29
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 475 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVL 642
+P + T + LP G G + RS L LK + + V+D DY+G + +V+
Sbjct: 678 LPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI 732
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,662,850
Number of Sequences: 237096
Number of extensions: 1319965
Number of successful extensions: 1895
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -