Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29o06
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD0853...   160   2e-39
AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB...   160   2e-39
AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA...   160   2e-39
AY061361-1|AAL28909.1|  940|Drosophila melanogaster LD28662p pro...    28   9.7  
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio...    28   9.7  
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot...    28   9.7  
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240...    28   9.7  
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot...    28   9.7  
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD...    28   9.7  
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC...    28   9.7  

>AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD08534
           protein.
          Length = 188

 Score =  160 bits (388), Expect = 2e-39
 Identities = 71/93 (76%), Positives = 84/93 (90%)
 Frame = +1

Query: 376 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 555
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 556 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 654
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHS
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHS 113


>AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB,
           isoform B protein.
          Length = 174

 Score =  160 bits (388), Expect = 2e-39
 Identities = 71/93 (76%), Positives = 84/93 (90%)
 Frame = +1

Query: 376 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 555
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 7   VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 66

Query: 556 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 654
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHS
Sbjct: 67  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHS 99


>AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA,
           isoform A protein.
          Length = 188

 Score =  160 bits (388), Expect = 2e-39
 Identities = 71/93 (76%), Positives = 84/93 (90%)
 Frame = +1

Query: 376 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 555
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 556 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 654
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHS
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHS 113


>AY061361-1|AAL28909.1|  940|Drosophila melanogaster LD28662p
           protein.
          Length = 940

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484 RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
           RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 583 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 625


>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
            coactivator blindspot protein.
          Length = 2618

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484  RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
            RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 2261 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 2303


>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj protein.
          Length = 2618

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484  RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
            RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 2261 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 2303


>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
            protein.
          Length = 2618

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484  RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
            RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 2261 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 2303


>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 protein.
          Length = 2618

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484  RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
            RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 2261 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 2303


>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
            isoform D protein.
          Length = 2618

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484  RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
            RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 2261 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 2303


>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
            isoform C protein.
          Length = 2618

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 484  RGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 612
            RG+ L K  + I++P     R AP   +ALK  +D   G+I +
Sbjct: 2261 RGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQ 2303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,313,233
Number of Sequences: 53049
Number of extensions: 439657
Number of successful extensions: 836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)