Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29o02
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-9|CAA99906.2|  187|Caenorhabditis elegans Hypothetical pr...    77   8e-15
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    33   0.23 
AF125971-1|AAD14769.2|  469|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical p...    27   8.5  
U23139-12|AAU20847.1|  262|Caenorhabditis elegans Hypothetical p...    27   8.5  

>Z75547-9|CAA99906.2|  187|Caenorhabditis elegans Hypothetical
           protein R11D1.9 protein.
          Length = 187

 Score = 77.4 bits (182), Expect = 8e-15
 Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
 Frame = +2

Query: 188 IEKNPPEWEYVKRLLPFTTIPKIIPKDSYP--SGWVPPKEEALNHPYFLSRTKNAELPIY 361
           +E+ P +W YV+RL+P   +P +   + YP  SGW PP E A  H Y++ R  +  LP+Y
Sbjct: 49  VEEAPIDWSYVERLMPIEVVPNVPEHEKYPTPSGWTPPTEAAKTHQYYIRRRHDHLLPLY 108

Query: 362 L---------KITYRGMRKISIIRKIEGDIWLLNDEIKQYLKQKNKRYVETRVHEVARLI 514
           L         K       ++  IR ++GDI+   ++++ YL++     + + V E+   I
Sbjct: 109 LERKRDLLNEKTLDFDYVELVTIRNVDGDIFACENDLRSYLEEHLGHSIASHVDELKGRI 168

Query: 515 ETKGDYVNDLREWALSKGF 571
           + KG     + ++  SKGF
Sbjct: 169 KIKGAPRVLIEQFFYSKGF 187


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 200 PPEWEYVKRLLPFTTIPKIIPKDSYPSGWVPPKEEA 307
           PP+    KR+ P T +PK +P  + P   VPP  EA
Sbjct: 765 PPKTTTEKRITPRTEVPKTVPPRTGPPMTVPPGTEA 800


>AF125971-1|AAD14769.2|  469|Caenorhabditis elegans Hypothetical
           protein Y4C6B.5 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 330 DKKYGWFNASSFGGT 286
           DKKYGWF+  S+G T
Sbjct: 291 DKKYGWFSGLSYGIT 305


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 425  WLLN-DEIKQYLKQKN-KRYVETRVHEVARLIETKGDYVN 538
            W++  D   QYL+Q +   YV+    E  R I  +GDYV+
Sbjct: 1626 WMIKLDATSQYLRQIDVPSYVQYNYIEKNRFINQRGDYVD 1665


>Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical
           protein C30H6.5 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 117 LQNITLVTENHRLCVKSKSNIIMK*KRIRQNGNTSNVCCRLLLYLR 254
           ++NI  V E  R C+++  N  +K K +  N NT N  C L  Y R
Sbjct: 97  IENIDDVNECLRKCIQAPMNHKIKCKTVMYNVNTQN--CVLSKYAR 140


>U23139-12|AAU20847.1|  262|Caenorhabditis elegans Hypothetical
           protein F13H8.1b protein.
          Length = 262

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 320 YFLSRTKNAELPIYLKITYRGMRKISIIRKIEGDIWLLNDEIKQYLKQK 466
           YF  + +   +P + +      +    IR+IE D WL  + +KQ L  K
Sbjct: 193 YFREQFEREGIPHWKRNLLADKKSKEAIRRIEHDAWLDFERVKQKLSTK 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,295,596
Number of Sequences: 27780
Number of extensions: 303087
Number of successful extensions: 974
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)