Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29n23
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14108-1|AAB17720.1| 350|Homo sapiens Mel-1a melatonin receptor... 30 6.3
BC126299-1|AAI26300.1| 350|Homo sapiens melatonin receptor 1A p... 30 6.3
BC126297-1|AAI26298.1| 350|Homo sapiens melatonin receptor 1A p... 30 6.3
BC074947-1|AAH74947.1| 350|Homo sapiens melatonin receptor 1A p... 30 6.3
BC074946-1|AAH74946.1| 350|Homo sapiens melatonin receptor 1A p... 30 6.3
AB029933-1|BAA85303.1| 350|Homo sapiens melatonin 1a receptor p... 30 6.3
BC109126-1|AAI09127.1| 872|Homo sapiens chromosome 10 open read... 30 8.3
BC058862-1|AAH58862.1| 589|Homo sapiens TSKS protein protein. 30 8.3
BC036225-1|AAH36225.1| 872|Homo sapiens chromosome 10 open read... 30 8.3
AL355378-1|CAI15667.1| 872|Homo sapiens novel protein protein. 30 8.3
AL162742-5|CAI12110.1| 872|Homo sapiens novel protein protein. 30 8.3
AF200923-1|AAF12819.3| 592|Homo sapiens testis-specific kinase ... 30 8.3
>U14108-1|AAB17720.1| 350|Homo sapiens Mel-1a melatonin receptor
protein.
Length = 350
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 129 WNTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISY 299
WN LH Q+ GL+ + +I + T INR +C S+ + +SK+++ Y
Sbjct: 93 WNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLK--YDKLYSSKNSLCY 147
>BC126299-1|AAI26300.1| 350|Homo sapiens melatonin receptor 1A
protein.
Length = 350
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 129 WNTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISY 299
WN LH Q+ GL+ + +I + T INR +C S+ + +SK+++ Y
Sbjct: 93 WNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLK--YDKLYSSKNSLCY 147
>BC126297-1|AAI26298.1| 350|Homo sapiens melatonin receptor 1A
protein.
Length = 350
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 129 WNTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISY 299
WN LH Q+ GL+ + +I + T INR +C S+ + +SK+++ Y
Sbjct: 93 WNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLK--YDKLYSSKNSLCY 147
>BC074947-1|AAH74947.1| 350|Homo sapiens melatonin receptor 1A
protein.
Length = 350
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 129 WNTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISY 299
WN LH Q+ GL+ + +I + T INR +C S+ + +SK+++ Y
Sbjct: 93 WNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLK--YDKLYSSKNSLCY 147
>BC074946-1|AAH74946.1| 350|Homo sapiens melatonin receptor 1A
protein.
Length = 350
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 129 WNTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISY 299
WN LH Q+ GL+ + +I + T INR +C S+ + +SK+++ Y
Sbjct: 93 WNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLK--YDKLYSSKNSLCY 147
>AB029933-1|BAA85303.1| 350|Homo sapiens melatonin 1a receptor
protein.
Length = 350
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 129 WNTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISY 299
WN LH Q+ GL+ + +I + T INR +C S+ + +SK+++ Y
Sbjct: 93 WNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLK--YDKLYSSKNSLCY 147
>BC109126-1|AAI09127.1| 872|Homo sapiens chromosome 10 open reading
frame 80 protein.
Length = 872
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 477 KHLDEMQQADKNVSKAMICDISKQVDTQMSKLDQMICQADRAQNSLQRQNKQL 635
KH E Q+A++ +I + + Q +LDQ+I + D + L R+N +L
Sbjct: 572 KHFIEKQEAEERKLLRIIAEADGERLRQKKELDQVISERDILGSQLVRRNDEL 624
>BC058862-1|AAH58862.1| 589|Homo sapiens TSKS protein protein.
Length = 589
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 90 LSAPPSRPCLPWIWNTAMLHDQMKEGTTGLTELNTILDSTQTKINRL 230
L+ PP+ P LPW + A + + + +GL + S + K NR+
Sbjct: 111 LAGPPASPTLPWDPDDADITEILSGVNSGLVRAKDSITSLKEKTNRV 157
>BC036225-1|AAH36225.1| 872|Homo sapiens chromosome 10 open reading
frame 80 protein.
Length = 872
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 477 KHLDEMQQADKNVSKAMICDISKQVDTQMSKLDQMICQADRAQNSLQRQNKQL 635
KH E Q+A++ +I + + Q +LDQ+I + D + L R+N +L
Sbjct: 572 KHFIEKQEAEERKLLRIIAEADGERLRQKKELDQVISERDILGSQLVRRNDEL 624
>AL355378-1|CAI15667.1| 872|Homo sapiens novel protein protein.
Length = 872
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 477 KHLDEMQQADKNVSKAMICDISKQVDTQMSKLDQMICQADRAQNSLQRQNKQL 635
KH E Q+A++ +I + + Q +LDQ+I + D + L R+N +L
Sbjct: 572 KHFIEKQEAEERKLLRIIAEADGERLRQKKELDQVISERDILGSQLVRRNDEL 624
>AL162742-5|CAI12110.1| 872|Homo sapiens novel protein protein.
Length = 872
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 477 KHLDEMQQADKNVSKAMICDISKQVDTQMSKLDQMICQADRAQNSLQRQNKQL 635
KH E Q+A++ +I + + Q +LDQ+I + D + L R+N +L
Sbjct: 572 KHFIEKQEAEERKLLRIIAEADGERLRQKKELDQVISERDILGSQLVRRNDEL 624
>AF200923-1|AAF12819.3| 592|Homo sapiens testis-specific kinase
substrate protein.
Length = 592
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 90 LSAPPSRPCLPWIWNTAMLHDQMKEGTTGLTELNTILDSTQTKINRL 230
L+ PP+ P LPW + A + + + +GL + S + K NR+
Sbjct: 111 LAGPPASPTLPWDPDDADITEILSGVNSGLVRAKDSITSLKEKTNRV 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,225,733
Number of Sequences: 237096
Number of extensions: 1729960
Number of successful extensions: 4122
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4121
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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