Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29n23
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.5
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 4.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3
Query: 109 RLGGAERISRQNLSHPVCPHS 47
R+G AE +S + + +CP++
Sbjct: 1706 RMGSAEGLSHRGMEDEICPYA 1726
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR 505
E +L E R +RY R+R + K+R+++ S+ D R
Sbjct: 25 EKEKLLEERTSRKRYSRSREREQKSYKNERKYRKYRERSKERSRDRTER 73
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR 505
E +L E R +RY R+R + K+R+++ S+ D R
Sbjct: 25 EKEKLLEERTSRKRYSRSREREQKSYKNERKYRKYRERSKERSRDRTER 73
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 359 EPNRLCERRAWPRRYRNVRKRAK*KTWRSTKWRRHQYGSETFR*DAASR*ECQQ 520
E +L E R RY R+R + ++++++ S+ D R C++
Sbjct: 25 EKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDRTERERCKE 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,374
Number of Sequences: 438
Number of extensions: 3568
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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