Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29n19
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0254 - 1893079-1893181,1893455-1893492,1893586-1893706,189... 241 4e-64
02_01_0273 + 1822370-1822503,1822913-1823258,1823393-1823635,182... 76 2e-14
01_04_0055 + 15462137-15462324,15467316-15467421,15468589-154688... 31 0.84
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 31 1.1
01_04_0058 + 15490220-15490545,15491786-15491849,15491950-154920... 31 1.1
11_01_0667 + 5436764-5437384,5437684-5437923,5438037-5438159,543... 30 1.5
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 30 1.9
11_01_0665 - 5413561-5413593,5413785-5413907,5414020-5414259,541... 30 1.9
02_02_0404 + 9876703-9877314,9877599-9877838,9877951-9878073,987... 29 2.6
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228... 29 3.4
09_04_0719 + 19716536-19716857,19716949-19717101,19717493-197177... 29 3.4
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 3.4
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 29 4.5
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 28 5.9
09_06_0371 + 22615809-22617431,22618312-22618422,22619361-226194... 28 5.9
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 28 5.9
08_01_0648 + 5602454-5602513,5602913-5603000,5603128-5604248,560... 28 5.9
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 28 7.8
09_04_0515 + 18238434-18238545,18238659-18238709,18238844-182388... 28 7.8
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937... 28 7.8
02_05_0324 + 27941007-27941322,27941818-27942164 28 7.8
>07_01_0254 -
1893079-1893181,1893455-1893492,1893586-1893706,
1893800-1893869,1894231-1894401,1894485-1894659,
1894746-1894933,1895023-1895166,1895316-1895379,
1895464-1895556,1895649-1895734,1896434-1896574,
1896658-1896804,1896970-1897057,1898080-1898235,
1898428-1898577
Length = 644
Score = 241 bits (590), Expect = 4e-64
Identities = 112/194 (57%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Frame = +3
Query: 96 SASLMRTTERIKLVVPHRNACVTVQHHCHDCLIIGAGGAGLRTAVGLAQQQFSVAVVSKL 275
+AS++ + R +L+ + TV H +D +++GAGGAGLR A+GL++ F+ A ++KL
Sbjct: 34 TASVVPSIPRPQLI--RATSSYTVVDHSYDAVVVGAGGAGLRAAIGLSEHGFNTACITKL 91
Query: 276 YPTRSHTIAAQGGMNAAIGSMHPDDWRWHFYDTVKGSDWLGDQDSIHYLTREAPNVAIEL 455
+PTRSHT+AAQGG+NAA+G+M DDWRWH YDTVKGSDWLGDQDSI Y+ REAP IEL
Sbjct: 92 FPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDSIQYMCREAPKAVIEL 151
Query: 456 ENMGMPFSRTKDGKIYQRPFGGSTTHNGK-EVAKRTCCVADRTGHALLHTLYGYSTKLKN 632
EN G+PFSRT+DGKIYQR FGG + GK A R C ADRTGHA+LHTLYG + K N
Sbjct: 152 ENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMK-HN 210
Query: 633 IDHFAEFFVLXLLI 674
F E+F L L++
Sbjct: 211 TQFFVEYFALDLIM 224
>02_01_0273 +
1822370-1822503,1822913-1823258,1823393-1823635,
1824212-1824268,1824407-1824487,1824725-1824786,
1824990-1826004
Length = 645
Score = 76.2 bits (179), Expect = 2e-14
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Frame = +3
Query: 87 KNLSASLMRTTERIKLVVPHRNACVTVQHHCH-DCLIIGAGGAGLRTAVGLAQQQFSVAV 263
K++SAS +R ++ + +C+ + + D ++IG+G AGLR A+ +++ SVA+
Sbjct: 53 KSVSASQLRMRHKVGSIRASAASCLQDETTKYFDFVVIGSGVAGLRYALEVSKYG-SVAI 111
Query: 264 VSKLYPTRSHTIAAQGGMNAAIGSMHPDDWRWHFYDTVKGSDWLGDQDSIHYLTREAPNV 443
++K P S+T AQGG++A + D H DT+ +L D++++ + E P
Sbjct: 112 ITKAEPHESNTNYAQGGVSAVL--CPSDSVESHMQDTIVAGAYLCDEETVRVVCTEGPER 169
Query: 444 AIELENMGMPFSRTKDGKIYQRPFGGSTTHNGKEVAKRTCCVADRTGHALLHTLYGYSTK 623
EL MG F +DG+++ GG +HN R AD TG + L
Sbjct: 170 VKELIAMGASFDHGEDGRLHLAREGGH-SHN------RIVHSADMTGREIERALLQAVDN 222
Query: 624 LKNIDHFAEFFVLXLL 671
NI F F + LL
Sbjct: 223 DDNISLFGHHFAIDLL 238
>01_04_0055 +
15462137-15462324,15467316-15467421,15468589-15468807,
15469826-15470172,15471365-15471428,15471519-15471624,
15471709-15471849,15473619-15473767,15473942-15474107,
15474216-15474259
Length = 509
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 189 LIIGAGGAGLRTAVGLAQQQFSVAVVSKLYPTRSHTIAAQGG 314
+++GAGGAG A G ++ V V ++ Y AA GG
Sbjct: 361 VVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGG 402
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 540 KEVAKRTCCVADRTGHALLHTLYGYSTKLKNIDHF 644
KE+ K CC+ DR +++ L ++ K+K + +F
Sbjct: 512 KEIFKWNCCLKDRDAQRIVNALLEHARKIKEMHNF 546
>01_04_0058 +
15490220-15490545,15491786-15491849,15491950-15492055,
15492144-15492284,15492601-15492749,15493106-15493271,
15493638-15493651
Length = 321
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 189 LIIGAGGAGLRTAVGLAQQQFSVAVVSKLYPTRSHTIAAQGG 314
+++GAGGAG A G ++ + V ++ Y AA GG
Sbjct: 183 VVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGG 224
>11_01_0667 +
5436764-5437384,5437684-5437923,5438037-5438159,
5438301-5438480
Length = 387
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 189 LIIGAGGAGLRTAVGLAQQQFSVAVVSKLYPTRS 290
LI+GAG AGL TA LAQ+ +V + T S
Sbjct: 10 LIVGAGPAGLATAACLAQRHVPYIIVERESSTAS 43
>11_06_0395 +
23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 345 DDWRWHFYDTVKGSDWLGDQDSIHYLTREAPNVAIELE 458
D W W F D V+G++ + D+ + L EA +ELE
Sbjct: 369 DKWLWQFRDAVEGAEDVLDEIDYYKLEEEAGVHNLELE 406
>11_01_0665 -
5413561-5413593,5413785-5413907,5414020-5414259,
5414564-5415184
Length = 338
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 189 LIIGAGGAGLRTAVGLAQQQFSVAVVSK 272
LI+GAG AGL TA LAQ+ +V +
Sbjct: 10 LIVGAGPAGLATAACLAQRHVPYVIVER 37
>02_02_0404 +
9876703-9877314,9877599-9877838,9877951-9878073,
9878195-9878374
Length = 384
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 189 LIIGAGGAGLRTAVGLAQQQFSVAVVSK 272
LIIGAG AGL TA L Q + A++ +
Sbjct: 7 LIIGAGPAGLATAACLTLQHVAYAIIER 34
>10_08_0824 +
20821724-20822137,20822457-20822543,20822729-20822829,
20822917-20822967,20823616-20823790,20823878-20824192,
20824504-20824707,20824799-20825314,20825400-20825609,
20826092-20826280,20827254-20827405,20827685-20827837,
20827925-20828006,20828086-20828475
Length = 1012
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/62 (20%), Positives = 22/62 (35%)
Frame = +3
Query: 327 IGSMHPDDWRWHFYDTVKGSDWLGDQDSIHYLTREAPNVAIELENMGMPFSRTKDGKIYQ 506
+ + W W ++T + D LTR N+ E +S + D +Y
Sbjct: 527 VSKLQERTWLWDLFETKAALENSSSDDDSQLLTRIIDNLVDESHESNQTYSDSNDTSLYN 586
Query: 507 RP 512
P
Sbjct: 587 YP 588
>09_04_0719 +
19716536-19716857,19716949-19717101,19717493-19717707,
19717785-19717855,19717998-19718157,19718598-19718790,
19718936-19719091,19719229-19719317,19719602-19719695,
19719870-19720039
Length = 540
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 180 HDCLIIGAGGAGLRTAVG-LAQQQFSVAVVSKLYPTRSHTIAAQGGMNAAIGSMHPDDW 353
HD +++GAG GL A L SVAV P T A QG + + + D W
Sbjct: 66 HDVVVVGAGIIGLSIARHLLLHTPLSVAVADAAVPCTGATGAGQGYLWMSHRTPGSDTW 124
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +3
Query: 198 GAGGAGLRTAVGLAQQQFSVAVVSKLY---PTRSHTIAAQGGMNAAIGSMHPDDWRWHFY 368
GAGG+G A Q S A + Y P H AA G + G HP H +
Sbjct: 218 GAGGSGKAAASSFLQLPLSTAAAATAYYGTPLALHQAAAAAGPSQYHGHGHPHHGGGHHH 277
Query: 369 DTVKGS 386
G+
Sbjct: 278 SKHGGA 283
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 279 PTRSHTIAAQGGMNAAIGSMHPDDWRWHFYDTVKGSDW 392
P++ T + GG + G + D+ W+F D S W
Sbjct: 877 PSKKETYSDHGGSESIFGDKYADETSWNFDDQDTESVW 914
>10_08_0731 +
20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 189 LIIGAGGAGLRTAVGLAQQQFSVAVV 266
+++GAG AGL A L +Q FSV V+
Sbjct: 743 IVVGAGPAGLTAARHLQRQGFSVTVL 768
>09_06_0371 +
22615809-22617431,22618312-22618422,22619361-22619453,
22619562-22619661,22619754-22619834,22620774-22621047,
22621254-22622069,22622921-22623029,22623509-22623602,
22623881-22623939,22624150-22624197
Length = 1135
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 392 PIRAFDSIIEVP--APIIRVHTTNSSIHSALRCDSVGPRWVQLGHYSYRELL 243
P+ A S+ +P I+R H T S +SA+R + GPR L YR +L
Sbjct: 30 PLAAAASLASLPYALSILRAHPTTFSYNSAIRALARGPR-PHLAISLYRSML 80
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 165 VQHHCHDCLIIGAGGAGLRTAVGLAQQ 245
+QH +D +I+G G AG A L+Q+
Sbjct: 45 IQHEAYDYIIVGGGTAGCPLAATLSQK 71
>08_01_0648 +
5602454-5602513,5602913-5603000,5603128-5604248,
5605146-5605217,5605218-5605373,5605458-5605748
Length = 595
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 510 PFGGSTTHNGKEVAKRTCCVADRTGHALLHTLYGYSTKLKNIDH 641
P GGS N K TCC D H L L L+ I H
Sbjct: 509 PSGGSFACNNLRKVKITCCKDDEMVHMLKQFLQRNGISLEKIVH 552
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 66 TMNILTLKNLSASLMRTTERIKLVVPHRNACVTVQHHC 179
T N+ +K L S M +++ V RN V HHC
Sbjct: 135 TGNVYAMKKLRKSEMLRRGQVEHVKAERNLLAEVDHHC 172
>09_04_0515 +
18238434-18238545,18238659-18238709,18238844-18238897,
18239727-18239777,18239845-18239895,18240056-18240210,
18240550-18240663,18240873-18240938,18241478-18241561,
18241640-18241726,18241975-18242066,18242163-18242223,
18242475-18242531,18243129-18243220,18243394-18243584,
18244203-18244321,18244518-18244589,18244699-18244784,
18244866-18244962,18245488-18245622
Length = 608
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 179 PRLPHHRSGGSRLANRRWSGATTILGSCSVQAVPNEVPHYRS 304
P P RSG +R+ NR T G V V EV H+R+
Sbjct: 65 PEAPPRRSGITRVPNRSPEMPTERAGRTKVSNVNLEVSHHRA 106
>09_02_0434 +
9365038-9366150,9367352-9368680,9368906-9370012,
9370960-9371022
Length = 1203
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 368 IEVPAPIIRVHTTNSSIHSALRCDSVGP 285
+ +P +++H+ S + ALRC + GP
Sbjct: 126 VNIPIESVQIHSQESILEEALRCITEGP 153
>02_05_0324 + 27941007-27941322,27941818-27942164
Length = 220
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 141 PHRNACVTVQHHCHDCLIIGAGGAGLRTAVGLAQQQFSVAVVSKLYPTRSH 293
P + + CH+ + A L + G Q+Q S V S+L P R+H
Sbjct: 48 PQYHLIYRTKRGCHNHIASVARSPDLTSGNGKTQRQCSTIVTSRLPPGRAH 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,814,039
Number of Sequences: 37544
Number of extensions: 431213
Number of successful extensions: 1498
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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