Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29n13
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical pr...   190   7e-49
AF119388-1|AAD31643.1|  457|Caenorhabditis elegans phenylalanine...   175   2e-44
U21308-14|ABB88222.1|  429|Caenorhabditis elegans Tryptophan hyd...   128   3e-30
U21308-13|ABB88221.1|  532|Caenorhabditis elegans Tryptophan hyd...   128   3e-30
AF135186-1|AAD30115.1|  532|Caenorhabditis elegans tryptophan hy...   128   3e-30
U80836-2|AAV58890.1|  454|Caenorhabditis elegans Abnormal catech...    94   1e-19
U80836-1|AAV58889.1|  393|Caenorhabditis elegans Abnormal catech...    94   1e-19
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z93396-3|CAB07712.1|  597|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    29   2.6  
U97010-2|AAB52319.1|  198|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z27079-2|CAA81589.1|  205|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical...    28   8.0  
AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical
           protein K08F8.4 protein.
          Length = 457

 Score =  190 bits (464), Expect = 7e-49
 Identities = 90/181 (49%), Positives = 126/181 (69%), Gaps = 7/181 (3%)
 Frame = +2

Query: 221 DEAGSLARYLGIFSSHGVNLSHIESRSSTRRPG-YEFMVECEHGS------GDFGAALEE 379
           ++AG+LA  L +F +H VNLSHIESR S    G YE +VE           G      ++
Sbjct: 38  EKAGALAETLKLFQAHDVNLSHIESRPSKTHEGCYEVLVEFAEAEDHRKIEGVIEHFQQK 97

Query: 380 LKKNVGYLNIISRNYKDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRD 559
            +K V   +  ++N K N+ +VPWFP++I D+D+FAN+ILSYGAELD+DHPGF D  YR+
Sbjct: 98  AEKKVLVQDWNTKN-KQNKDSVPWFPQKINDIDQFANRILSYGAELDADHPGFKDMTYRE 156

Query: 560 RRKYFADIAYNYKHGEPLPYVEYTKEEVATWGVVFRKLTELYPTHACKEHXHVFPLLIEN 739
           RRK+FADIA+N+KHG+ +P + YT EE+ATW  V+ +LT +YP +AC+E  ++FPLL +N
Sbjct: 157 RRKFFADIAFNFKHGDKIPTITYTDEEIATWRTVYNELTVMYPKNACQEFNYIFPLLQQN 216

Query: 740 C 742
           C
Sbjct: 217 C 217


>AF119388-1|AAD31643.1|  457|Caenorhabditis elegans phenylalanine
           hydroxylase protein.
          Length = 457

 Score =  175 bits (427), Expect = 2e-44
 Identities = 86/184 (46%), Positives = 121/184 (65%), Gaps = 10/184 (5%)
 Frame = +2

Query: 221 DEAGSLARYLGIFSSHGVNLSHIESRSSTRRPGYEFMVECEHGSGDFGAALEELKKNVGY 400
           ++AG+LA  L +F +H VNLSHIESR S         + C          +  LK+ +  
Sbjct: 38  EKAGALAETLKLFQAHDVNLSHIESRPSRLMKD---AMRCSLNLLKL-KTIVRLKELLSI 93

Query: 401 LNI-ISRNY---------KDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPV 550
            N  + R +         K N+ +VPWFP++I D+D+FAN+ILSYGAELD+DHPGF D  
Sbjct: 94  SNKKLKRRFLFKTGTPKTKQNKDSVPWFPQKINDIDQFANRILSYGAELDADHPGFKDMT 153

Query: 551 YRDRRKYFADIAYNYKHGEPLPYVEYTKEEVATWGVVFRKLTELYPTHACKEHXHVFPLL 730
           YR+RRK+FADIA+N+KHG+ +P + YT EE+ATW  V+ +LT +YP +AC+E  ++FPLL
Sbjct: 154 YRERRKFFADIAFNFKHGDKIPTITYTDEEIATWRTVYNELTVMYPKNACQEFNYIFPLL 213

Query: 731 IENC 742
            +NC
Sbjct: 214 QQNC 217


>U21308-14|ABB88222.1|  429|Caenorhabditis elegans Tryptophan
           hydroxylase protein1, isoform b protein.
          Length = 429

 Score =  128 bits (310), Expect = 3e-30
 Identities = 55/105 (52%), Positives = 70/105 (66%)
 Frame = +2

Query: 428 DNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRDRRKYFADIAYNYKHGE 607
           D  +   WFP+ I DLD  A +++ YGA LD+DHPGF D  YR RR  FA++A NYKHGE
Sbjct: 77  DATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHGE 136

Query: 608 PLPYVEYTKEEVATWGVVFRKLTELYPTHACKEHXHVFPLLIENC 742
           P+P  EYT  E  TWG+++RKL EL+  HACK+    F LL  +C
Sbjct: 137 PIPRTEYTSSERKTWGIIYRKLRELHKKHACKQFLDNFELLERHC 181


>U21308-13|ABB88221.1|  532|Caenorhabditis elegans Tryptophan
           hydroxylase protein1, isoform a protein.
          Length = 532

 Score =  128 bits (310), Expect = 3e-30
 Identities = 55/105 (52%), Positives = 70/105 (66%)
 Frame = +2

Query: 428 DNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRDRRKYFADIAYNYKHGE 607
           D  +   WFP+ I DLD  A +++ YGA LD+DHPGF D  YR RR  FA++A NYKHGE
Sbjct: 180 DATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHGE 239

Query: 608 PLPYVEYTKEEVATWGVVFRKLTELYPTHACKEHXHVFPLLIENC 742
           P+P  EYT  E  TWG+++RKL EL+  HACK+    F LL  +C
Sbjct: 240 PIPRTEYTSSERKTWGIIYRKLRELHKKHACKQFLDNFELLERHC 284


>AF135186-1|AAD30115.1|  532|Caenorhabditis elegans tryptophan
           hydroxylase protein.
          Length = 532

 Score =  128 bits (310), Expect = 3e-30
 Identities = 55/105 (52%), Positives = 70/105 (66%)
 Frame = +2

Query: 428 DNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRDRRKYFADIAYNYKHGE 607
           D  +   WFP+ I DLD  A +++ YGA LD+DHPGF D  YR RR  FA++A NYKHGE
Sbjct: 180 DATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHGE 239

Query: 608 PLPYVEYTKEEVATWGVVFRKLTELYPTHACKEHXHVFPLLIENC 742
           P+P  EYT  E  TWG+++RKL EL+  HACK+    F LL  +C
Sbjct: 240 PIPRTEYTSSERKTWGIIYRKLRELHKKHACKQFLDNFELLERHC 284


>U80836-2|AAV58890.1|  454|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 2, isoform b protein.
          Length = 454

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
 Frame = +2

Query: 146 EGGNYIREGRDSTKSTW-LLISPVAPDEAGSLARYLGIFSSHGVNLSHIESRSSTRRPGY 322
           EG   I    D T   + ++++   P  +  ++  L   SS  V + H+E+R +     +
Sbjct: 13  EGIEVIFTANDVTPIEFSIILTSTDPTLSNFVSDILQNMSSAKVQICHVETRGN--EASH 70

Query: 323 EFMVECEHGSGDFGAALEELKKN---VGYLNIISRNYKD--NRSAVPWFPRRIRDLDRFA 487
           + ++ C+        + E L +N   +   +I ++   D  N+S + WFPR I +LD+ +
Sbjct: 71  DVLLACKATKNQLIHSAELLTQNHVALTKFSIFAKKLSDEKNQSQI-WFPRHISELDQCS 129

Query: 488 NQILSYGAELDSDHPGFTDPVYRDRRKYFADIAYNYKHGEPLPYVEYTKEEVATWGVVFR 667
             I  Y    D  HPG  D  Y  RRK+  D A  +K G+ + YV+YT+EE ATW  V+ 
Sbjct: 130 KCITKYEPTTDPRHPGHGDVAYIARRKFLNDQALEFKFGDEIGYVDYTEEEHATWKAVYE 189

Query: 668 KLTELYPTHACKEHXHVFPLLIE 736
           KL +L+ +H C  +     +L E
Sbjct: 190 KLGDLHLSHTCAVYRQNLKILQE 212


>U80836-1|AAV58889.1|  393|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 2, isoform a protein.
          Length = 393

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
 Frame = +2

Query: 146 EGGNYIREGRDSTKSTW-LLISPVAPDEAGSLARYLGIFSSHGVNLSHIESRSSTRRPGY 322
           EG   I    D T   + ++++   P  +  ++  L   SS  V + H+E+R +     +
Sbjct: 83  EGIEVIFTANDVTPIEFSIILTSTDPTLSNFVSDILQNMSSAKVQICHVETRGN--EASH 140

Query: 323 EFMVECEHGSGDFGAALEELKKN---VGYLNIISRNYKD--NRSAVPWFPRRIRDLDRFA 487
           + ++ C+        + E L +N   +   +I ++   D  N+S + WFPR I +LD+ +
Sbjct: 141 DVLLACKATKNQLIHSAELLTQNHVALTKFSIFAKKLSDEKNQSQI-WFPRHISELDQCS 199

Query: 488 NQILSYGAELDSDHPGFTDPVYRDRRKYFADIAYNYKHGEPLPYVEYTKEEVATWGVVFR 667
             I  Y    D  HPG  D  Y  RRK+  D A  +K G+ + YV+YT+EE ATW  V+ 
Sbjct: 200 KCITKYEPTTDPRHPGHGDVAYIARRKFLNDQALEFKFGDEIGYVDYTEEEHATWKAVYE 259

Query: 668 KLTELYPTHACKEHXHVFPLLIE 736
           KL +L+ +H C  +     +L E
Sbjct: 260 KLGDLHLSHTCAVYRQNLKILQE 282


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
 Frame = +2

Query: 371 LEELKKNVGYLNIISRNYKDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPV 550
           L+E  K  G+  +    YK        FP+ IR++++ +   L + A+    H       
Sbjct: 715 LDEATKVNGFREVFKPAYKQLLKTPKLFPKEIRNIEKLSKLDLHFAAQKGHLHAASLS-- 772

Query: 551 YRDRRKYFADI-AYNYKHGEPLPYVEY 628
           + D   YF  I   ++KH E     +Y
Sbjct: 773 FNDLETYFDTIFGLDHKHEEAEVQTDY 799


>Z93396-3|CAB07712.1|  597|Caenorhabditis elegans Hypothetical
           protein ZC15.5 protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 534 DLPILFTATAANISPTLHT-TTSTESLCLMWSTPKRRWPPG 653
           DL ++ T T++  S  +   T S +S+   W  PK R PPG
Sbjct: 410 DLTVIGTTTSSGQSRAIAALTASGQSIKGQWELPKNRLPPG 450


>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
            protein Y11D7A.14 protein.
          Length = 1464

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/87 (20%), Positives = 39/87 (44%)
 Frame = +2

Query: 311  RPGYEFMVECEHGSGDFGAALEELKKNVGYLNIISRNYKDNRSAVPWFPRRIRDLDRFAN 490
            + G E ++E E    +F   +EE+++N    N++ R Y +    V      +R+ +R   
Sbjct: 884  KQGREKLLEKER---EFRKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERKIE 940

Query: 491  QILSYGAELDSDHPGFTDPVYRDRRKY 571
            Q+     +L++++    +   R    Y
Sbjct: 941  QLNMEKTDLENENQKLRETQNRQDSHY 967


>U97010-2|AAB52319.1|  198|Caenorhabditis elegans Hypothetical
           protein W08A12.3 protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +2

Query: 23  YISHSR*EHTPLPATEKEMDITAKQIE---QPTSGSPPDKPKLMEGGNYIREGRDSTKST 193
           YIS  R + TPLP   + + I  K  E   + T  S P K   ME    I     +++ST
Sbjct: 88  YISDPRVDSTPLPPLPEPIVIPRKSAERDRESTKKSSPSKKVRMESEETINTNTTNSQST 147


>Z27079-2|CAA81589.1|  205|Caenorhabditis elegans Hypothetical
           protein T05G5.2 protein.
          Length = 205

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -1

Query: 420 FLEIIFRYPTFFFSSSRAAPKSPEPC---SHSTMNS 322
           +++ +  YPT+F+  S A P  P P    SH  +N+
Sbjct: 159 YMKSLLDYPTYFYQPSTAPPPPPAPTAPQSHLIVNN 194


>AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical
           protein K07H8.1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +2

Query: 398 YLNIISRNYKDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRDRRK 568
           Y N++ + +K  R  + +FPR I++L+   N++  +  E D D     D VY D  K
Sbjct: 150 YGNLLYK-WKTVRQILEYFPR-IQELNLRRNRMQCFNEEEDDDESEGDDHVYSDSCK 204


>AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.8 protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = +2

Query: 473 LDRFANQILS---YGAELDSDHPGF 538
           LD FANQILS    G  LD+DH  +
Sbjct: 305 LDEFANQILSSKYKGTSLDTDHTAY 329


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,405,003
Number of Sequences: 27780
Number of extensions: 458749
Number of successful extensions: 1585
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)