Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29n12
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 159 2e-39
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 159 2e-39
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 158 3e-39
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 153 7e-38
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 153 7e-38
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 132 2e-31
U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical pr... 29 1.9
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 29 3.3
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 27 7.6
AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical ... 27 7.6
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 159 bits (385), Expect = 2e-39
Identities = 73/141 (51%), Positives = 94/141 (66%)
Frame = +3
Query: 168 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 347
FLNL K A Y+WID SG N+R+K R D EP D E +P W++DGSSTGQ++ DS
Sbjct: 19 FLNLD-QKGMYQALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADS 77
Query: 348 DITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQ 527
D+ L PVA+Y DPFR+ + +V+CETY ++ PT TN+R + K DQ PWFG+EQ
Sbjct: 78 DVYLKPVAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQ 137
Query: 528 EYTMFDRDHWPLGWPKPRGYP 590
EYT+ D D P GWPK G+P
Sbjct: 138 EYTLLDIDGHPFGWPK-NGFP 157
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 159 bits (385), Expect = 2e-39
Identities = 73/141 (51%), Positives = 94/141 (66%)
Frame = +3
Query: 168 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 347
FLNL K A Y+WID SG N+R+K R D EP D E +P W++DGSSTGQ++ DS
Sbjct: 22 FLNLD-QKGMYQALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADS 80
Query: 348 DITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQ 527
D+ L PVA+Y DPFR+ + +V+CETY ++ PT TN+R + K DQ PWFG+EQ
Sbjct: 81 DVYLKPVAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQ 140
Query: 528 EYTMFDRDHWPLGWPKPRGYP 590
EYT+ D D P GWPK G+P
Sbjct: 141 EYTLLDIDGHPFGWPK-NGFP 160
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 158 bits (383), Expect = 3e-39
Identities = 74/146 (50%), Positives = 97/146 (66%)
Frame = +3
Query: 153 AYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQS 332
A ++F+ LP K ATYVWID +G +LR+K R ++ +P L P W+YDGSSTGQ+
Sbjct: 15 ATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSSTGQA 74
Query: 333 DLKDSDITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPW 512
D +SD L PVAV+ DPF +++V+C+T E PT TNHR A + K+ DQ+PW
Sbjct: 75 DGLNSDRYLRPVAVFPDPFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSDQQPW 134
Query: 513 FGIEQEYTMFDRDHWPLGWPKPRGYP 590
FG+EQEY + DRD PLGWPK GYP
Sbjct: 135 FGMEQEYLIVDRDEHPLGWPK-HGYP 159
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 153 bits (372), Expect = 7e-38
Identities = 71/146 (48%), Positives = 95/146 (65%)
Frame = +3
Query: 153 AYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQS 332
A ++F+ LP +K ATYVWID +G LR+K R + +P L P W+YDGSSTGQ+
Sbjct: 15 ATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSSTGQA 74
Query: 333 DLKDSDITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPW 512
+ +SD L PVAV+ DPF + +++V+CET PT TNHR + A + K+ + PW
Sbjct: 75 EGLNSDRYLRPVAVFPDPFLQGHNVLVMCETLDETMKPTATNHRQNCAAIMKKVAEHHPW 134
Query: 513 FGIEQEYTMFDRDHWPLGWPKPRGYP 590
FG+EQEY + DRD PLGWPK GYP
Sbjct: 135 FGMEQEYLIVDRDEHPLGWPK-HGYP 159
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 153 bits (372), Expect = 7e-38
Identities = 76/147 (51%), Positives = 94/147 (63%)
Frame = +3
Query: 153 AYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQS 332
A + FL L KI ATYVWID +G NLRSK R DK P +E P W+YDGSSTGQ+
Sbjct: 15 AVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSSTGQA 74
Query: 333 DLKDSDITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPW 512
+DSD L PVA Y DPF + +V+C+T + PT T+HR + A + +I D PW
Sbjct: 75 KGRDSDRYLRPVAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMHEIRDTRPW 134
Query: 513 FGIEQEYTMFDRDHWPLGWPKPRGYPD 593
FG+EQEY + DRD PLGWPK G+PD
Sbjct: 135 FGMEQEYLIVDRDEHPLGWPK-HGFPD 160
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 132 bits (319), Expect = 2e-31
Identities = 60/133 (45%), Positives = 81/133 (60%)
Frame = +3
Query: 192 NKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDSDITLLPVA 371
N Y+WIDA+ N+R K + D EP +P W++DG+STGQS + SD+ + P+A
Sbjct: 29 NNYQVMYIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIA 88
Query: 372 VYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQEYTMFDRD 551
+YRDPFR P+ I LCET + + P PTN R + K DQEPWFG+EQE+T+ D
Sbjct: 89 LYRDPFRPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGAD 148
Query: 552 HWPLGWPKPRGYP 590
P WP G+P
Sbjct: 149 KHPYNWP-VNGFP 160
>U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical
protein Y102E9.2 protein.
Length = 388
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = -1
Query: 415 KTIICGLLRKGSLYTATGSSVISESFRSDCPVELPSYDHFGTISKSQGSLSNIRSLDRKF 236
+T++ L + SL T T S++ ES C + D+F + +S L ++ ++++KF
Sbjct: 265 ETVVIVDLNQESLQT-TSVSIVGES---QCLDIASTKDYFAVLGRSTVHLIDLNNMEQKF 320
Query: 235 IPL 227
+P+
Sbjct: 321 VPI 323
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 522 EQEYTMFDRDHWPLGWPKPRGY 587
E + + D WPL WPKPR +
Sbjct: 18 ENDLWLDDFRDWPLDWPKPRDF 39
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 132 GHPGSHDAYYNYFLNLPFPKNKIFATYVWIDASGINLRSKDR 257
G H Y + F + T+ W DA+GIN S DR
Sbjct: 43 GRVFEHKRYDRIYETEDFDSEDLPKTWDWRDANGINYASADR 84
>AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical
protein Y19D10B.5 protein.
Length = 575
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 225 HQSIHRWQKFYFSETVN-LKSNCSTHHAILDAQRYC*YLNNKHVSYFYTLNSLIG 64
HQ I ++ + SETV +NCST A L R C ++ S F + LIG
Sbjct: 219 HQCIF-YEYYINSETVTWFPTNCSTVCADLKIDRICDLTEDQLKSTFRNMKHLIG 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,800,927
Number of Sequences: 27780
Number of extensions: 329289
Number of successful extensions: 853
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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