Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29m21
(632 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 43 4e-05
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 42 6e-05
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 39 7e-04
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 38 0.001
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 38 0.002
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 38 0.002
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 37 0.002
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 37 0.002
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 37 0.002
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 37 0.003
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 37 0.003
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 36 0.004
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 36 0.006
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 36 0.006
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 35 0.008
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 34 0.020
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 34 0.020
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 33 0.026
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.026
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.026
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 33 0.045
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 32 0.060
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 32 0.079
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.18
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 31 0.18
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 31 0.18
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 30 0.32
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 30 0.32
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 29 0.42
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.42
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 29 0.56
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 29 0.56
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 29 0.56
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 29 0.56
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 29 0.56
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 29 0.74
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.74
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 0.97
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 28 0.97
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 28 1.3
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 28 1.3
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 27 2.3
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 2.3
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 27 2.3
SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 27 3.0
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 3.0
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 3.0
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 3.9
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 26 3.9
SPAC977.02 |||S. pombe specific 5Tm protein family|Schizosacchar... 26 5.2
SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 5.2
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 26 5.2
SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.2
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 25 6.9
SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.9
SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr... 25 6.9
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 42.7 bits (96), Expect = 4e-05
Identities = 26/104 (25%), Positives = 47/104 (45%)
Frame = +2
Query: 191 SGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGSQ 370
+G ++IF+++ I + + ++ F F +G T++VWDL G+
Sbjct: 102 TGLVQIFDLSTRSILRALD---AHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLSTGAV 158
Query: 371 VYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPR 502
Y H D + + M A +V+G DGT+++WD R
Sbjct: 159 QYDLSGHEDYVRTASWM-------SATRLVSGGYDGTIRLWDTR 195
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 308 RFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGM--GGNTTNCGAPEI 457
R +G + GT+ +WD ++ H + I+ + M G + G P I
Sbjct: 179 RLVSGGYDGTIRLWDTRIADPEVMSFSHGEAIDVVLPMQSGSTVISAGGPSI 230
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 42.3 bits (95), Expect = 6e-05
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Frame = +2
Query: 188 GSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGS 367
GSGTI+I G ++ R K G + E +G T+ VW++EK
Sbjct: 369 GSGTIQIHNAITGVLEA-----RLEGHKEGVWAVKIH-ENTLVSGSIDKTVRVWNIEKAK 422
Query: 368 QVYITKEHSDIINSIDGM--------GGNTTNCGAPEIVTGSRDGTVKVWD-PRQRGKP 517
+I + H II ++ + G P IV+GSRD T++VW P+ P
Sbjct: 423 CTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPP 481
Score = 33.5 bits (73), Expect = 0.026
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 302 ERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGT 481
+ R +G T+ +WDL G + + +S I+S +I++G+ DG+
Sbjct: 599 QNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVS--------DEHKIISGN-DGS 649
Query: 482 VKVWDPR 502
VK+WD R
Sbjct: 650 VKLWDVR 656
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 38.7 bits (86), Expect = 7e-04
Identities = 30/134 (22%), Positives = 56/134 (41%)
Frame = +2
Query: 188 GSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGS 367
G G ++ FE N +K ++ E A S + +F T G+L+VW+ +
Sbjct: 143 GGGMVKYFEPNLNNVKIVQAHEMEVRDV-----AFSPNDSKFVTASDDGSLKVWNFHMST 197
Query: 368 QVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRGKPVANMQPMQGE 547
+ H + ++D + +GS+D VK WDPR G +A + +
Sbjct: 198 EELKLTGHGWDVKTVDWHPSKGL------LASGSKDNLVKFWDPR-TGTCIATLHGHKNT 250
Query: 548 TRRDCWAVGFGNSF 589
+ + FG+++
Sbjct: 251 IMQASFQKNFGSNY 264
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 38.3 bits (85), Expect = 0.001
Identities = 32/120 (26%), Positives = 57/120 (47%)
Frame = +2
Query: 164 IVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLE 343
I++ +P+ +E +E ++ I E+ + +S K G A+ T++
Sbjct: 106 IMIWKVPEDYTVMEPYE----DVHPIAEL-KGHSRKVGLVQYHPTAANVLASSSADNTIK 160
Query: 344 VWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRGKPVA 523
+WD EKG +++ + + S+ + N +VT SRD V+VWDPR KPV+
Sbjct: 161 LWDCEKGV-AHVSLKMDVMCQSM------SFNADGTRLVTTSRDKKVRVWDPR-TDKPVS 212
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 332 GTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRG 511
G L VWD+ + +Y EHS ++ +D ++ ++T S+DG +K+WD ++
Sbjct: 114 GNLNVWDVNLEALLYDFNEHSRAVHKLD-----ISSFHPSYVLTASQDGLIKLWDYKESS 168
Query: 512 KPV 520
+
Sbjct: 169 STI 171
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 37.5 bits (83), Expect = 0.002
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Frame = +2
Query: 158 KFIVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGT 337
+FI +GS G ++I + + G + ++++ + + + FATGD G
Sbjct: 73 EFISVGS----DGVLKIADTSTGRVSSKWIVDKNKEISPYSVVQWIENDMVFATGDDNGC 128
Query: 338 LEVWDLE-KGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRGK 514
+ VWD +G ++ +H D I+SI V S DG + V D R K
Sbjct: 129 VSVWDKRTEGGIIHTHNDHIDYISSISPFEER-------YFVATSGDGVLSVIDARNFKK 181
Query: 515 PV 520
P+
Sbjct: 182 PI 183
Score = 29.9 bits (64), Expect = 0.32
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +2
Query: 188 GSGTIEIFEINAGEIKK-IKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKG 364
G G + + I+A KK I E+ CG F +++FA G G + ++ KG
Sbjct: 167 GDGVLSV--IDARNFKKPILSEEQDEEMTCGAFTRDQHSKKKFAVGTASGVITLF--TKG 222
Query: 365 SQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKV 490
T I S D T + + G DG +++
Sbjct: 223 DWGDHTDRILSPIRSHDFSIETITRADSDSLYVGGSDGCIRL 264
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 37.1 bits (82), Expect = 0.002
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +2
Query: 119 HSLFDCKWIPCSAKFIVLGSLPKGSGTIEIFEINAGEIKKIK--EIERSNSFKCGTFGAS 292
H + D + S KF G G I+++++N G++ + + + N+ + +
Sbjct: 57 HEILDLDLVYDSTKFASCG----GDKFIQVWDVNTGKVDRRLGGHLAQINTIR---YNED 109
Query: 293 SDIERRFATGDFRGTLEVWDLEKGS--QVYITKEHSDIINSIDGMGGNTTNCGAPEIVTG 466
S I A+G F + +WD S + + + D ++SID IVTG
Sbjct: 110 SSI---LASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSID--------IAEHLIVTG 158
Query: 467 SRDGTVKVWDPRQ 505
S DGT++ +D R+
Sbjct: 159 STDGTLRTYDIRK 171
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 290 SSDIERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGS 469
S R TG T +WD + + + K H++ ++ + A I TGS
Sbjct: 143 SPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPD------ASIIATGS 196
Query: 470 RDGTVKVWDPRQRGKPVAN 526
D T++ WDP+ +G P+ +
Sbjct: 197 MDNTIRFWDPK-KGSPIGD 214
Score = 34.7 bits (76), Expect = 0.011
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVY-ITKEHSDIINSIDGMGGNTTNCGAPEIV-TGSRDGTVK 487
ATG T+ WD +KGS + + H+ I ++ + P ++ +GS+D TV+
Sbjct: 193 ATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVR 252
Query: 488 VWDPRQR 508
+W+ + R
Sbjct: 253 IWNVKLR 259
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 455 IVTGSRDGTVKVWDPRQRGKPVANMQPMQ 541
+V+ S D + +WDP++ KP+ M Q
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQ 389
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 37.1 bits (82), Expect = 0.002
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 308 RFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVK 487
+ AT T+++WDL K S + HS +++ + + I T DG VK
Sbjct: 363 QLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRF----IATSGYDGCVK 418
Query: 488 VWDPRQRGKPVANMQPMQGETRRDCWAVGFGNSFNDS 598
+W+P + ++ M G + G+G+ F S
Sbjct: 419 LWNPLN----CSLIKSMVGHEEKVMSVDGYGDRFISS 451
Score = 34.7 bits (76), Expect = 0.011
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 344 VWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQ 505
+WDL G + + EH I I M + ++ T S D TVK+WD R+
Sbjct: 333 IWDLRSGKSIMVLDEH---IRQIVAMAWSPNGY---QLATSSADDTVKIWDLRK 380
Score = 34.3 bits (75), Expect = 0.015
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 311 FATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDG---MGGNTTNCGAPEIVTGSRDGT 481
FA+G + G ++VW+ + S+V + + H+D ++ +D + + TG+ D T
Sbjct: 187 FASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNT 246
Query: 482 VKVWDPRQ 505
V +W Q
Sbjct: 247 VCLWKASQ 254
Score = 30.3 bits (65), Expect = 0.24
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +2
Query: 293 SDIERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSR 472
S + R AT + G +++W+ S + H + + S+DG G ++
Sbjct: 402 SGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYG--------DRFISSGY 453
Query: 473 DGTVKVWDP 499
D T+K+W P
Sbjct: 454 DRTIKLWYP 462
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+ F T +WD+ G ++ + + HS+ I SI + + +G D ++WD
Sbjct: 282 SASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSL------VSSGGNDAIGRIWD 335
Query: 497 PRQRGKPV 520
R GK +
Sbjct: 336 LRS-GKSI 342
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 374 YITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
Y H+D + ID + G+ G +VTGS DG+V WD
Sbjct: 211 YCLDSHADSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWD 251
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 335 TLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
T+ +WDLEKG + H+ + S+ N ++V+GSRD T+K+W+
Sbjct: 86 TIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR------QVVSGSRDKTIKIWN 133
Score = 31.1 bits (67), Expect = 0.14
Identities = 29/111 (26%), Positives = 48/111 (43%)
Frame = +2
Query: 164 IVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLE 343
+V GS K TI+I+ I I + S+ C F + D F + + ++
Sbjct: 120 VVSGSRDK---TIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPD-NLTFVSAGWDKAVK 175
Query: 344 VWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
VWDLE S H+ ++++ T + +G RDGT+ +WD
Sbjct: 176 VWDLETFSLRTSHYGHTGYVSAV------TISPDGSLCASGGRDGTLMLWD 220
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDI 400
A+G GTL +WDL + + +Y + ++I
Sbjct: 208 ASGGRDGTLMLWDLNESTHLYSLEAKANI 236
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 335 TLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
T+ +WD EK V K H++ ++SID N +V+GS D TV++W+
Sbjct: 119 TIRIWDFEKRCSVRCLKGHTNYVSSID------FNPLGTLLVSGSWDETVRIWN 166
Score = 32.7 bits (71), Expect = 0.045
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+G + T+ +W+L+ G+ + + HS+ I S+ + + T C T S DG ++WD
Sbjct: 155 SGSWDETVRIWNLQDGTCLRMLPAHSEPIISV-SISADGTLC-----ATASYDGMARIWD 208
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 35.5 bits (78), Expect = 0.006
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +2
Query: 308 RFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVK 487
+ A+G + +V+D++ G + H D + + + T+ P + TGS D T+K
Sbjct: 88 KVASGSVDKSAKVFDIQTGQNQQVAA-HDDAVRCVRFVEAMGTS---PILATGSWDKTLK 143
Query: 488 VWDPRQRGKPVANMQPMQGETRRDC 562
WD RQ P+A + + DC
Sbjct: 144 YWDLRQ-STPIATVSLPERVYAMDC 167
Score = 29.1 bits (62), Expect = 0.56
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +2
Query: 164 IVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLE 343
+ GS+ K + ++F+I G+ +++ ++ +C F + ATG + TL+
Sbjct: 89 VASGSVDKSA---KVFDIQTGQNQQVAA--HDDAVRCVRFVEAMGTSPILATGSWDKTLK 143
Query: 344 VWDLEKGSQV 373
WDL + + +
Sbjct: 144 YWDLRQSTPI 153
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 35.5 bits (78), Expect = 0.006
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +2
Query: 188 GSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGS 367
GSG + I ++ I+ + + +S + + + + GD G+L ++DL S
Sbjct: 36 GSGRLYIHDVTPKGIQVCQHYDVEDSLFGVRWSQNCENQVYACCGD--GSLRLFDLTMPS 93
Query: 368 Q-VYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
+ ++ KEH I +ID T +VTGS DGT+K+W
Sbjct: 94 KPIHKWKEHKAEIVAID-----TNTVDRRIVVTGSWDGTIKLW 131
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 320 GDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDP 499
G G +++WDL ++ K H DII S+ + +++ S D TV+++D
Sbjct: 195 GGIDGAIKIWDLRNNHCSHVLKGHKDIITSL------AISKDGSSLLSNSMDNTVRIFDV 248
Query: 500 RQRGKPVANMQPMQG 544
+ +Q +G
Sbjct: 249 KPFASAQRQLQIFEG 263
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 347 WDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQR 508
WD G ++ K H+ ++N++D G+ + + S D T+KVWD R +
Sbjct: 120 WDAVSGQKIRKHKGHAGVVNALD-----VLKVGSELLTSVSDDCTMKVWDSRSK 168
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 33.9 bits (74), Expect = 0.020
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = +2
Query: 143 IPCSAKFIVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATG 322
+ C F ++GS G ++++ + +G IK+ + S S K T ++ R T
Sbjct: 452 VSCCGNFGLIGS---SKGVVDVYNMQSG-IKRKSFGQSSLSGKPVTAVMLDNVNRILVTA 507
Query: 323 DFRGTLEVWDLEKGSQVYITKEHSDIINSI 412
G L+ WD KG+ + S I ++I
Sbjct: 508 SLDGILKFWDFNKGNLIDSLDVGSSITHAI 537
Score = 27.1 bits (57), Expect = 2.3
Identities = 26/101 (25%), Positives = 47/101 (46%)
Frame = +2
Query: 194 GTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGSQV 373
G ++ ++ N G + I ++ +S + SSD+ A DF + + D++ V
Sbjct: 511 GILKFWDFNKGNL--IDSLDVGSSITHAIYQHSSDLVA-VACDDFG--IRIVDVQTRKIV 565
Query: 374 YITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
HS+ + S D ++ G +VT S DGT++ WD
Sbjct: 566 RELWGHSNRLTSFD-----FSDTGR-WLVTASLDGTIRTWD 600
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 33.9 bits (74), Expect = 0.020
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 344 VWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
VWD+ V++ H + S+ + P++VTGS D T+++WD
Sbjct: 273 VWDMRTRQNVHVLSGHKSTVASLAVQEFD------PQVVTGSMDSTIRLWD 317
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 33.5 bits (73), Expect = 0.026
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 311 FATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKV 490
FAT T +WD+E + + + H + ++ + + + A + TGS D T ++
Sbjct: 460 FATASHDQTARLWDVEHAAPLRVFVGHQNDVDCV------SFHPNAAYLATGSSDHTTRM 513
Query: 491 WDPRQRG 511
WD R G
Sbjct: 514 WDVRTGG 520
Score = 32.3 bits (70), Expect = 0.060
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
A+ D G ++VWDL +Q +HS I+ S+ N +V+G D V W
Sbjct: 545 ASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKI------LVSGGADTDVNFW 598
Query: 494 D 496
D
Sbjct: 599 D 599
Score = 30.3 bits (65), Expect = 0.24
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
ATG T +WD+ G V + H ++++ + + + G +KVW
Sbjct: 503 ATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSAL------CMSADGLSLASADESGIIKVW 556
Query: 494 DPRQRGKPVA 523
D R + V+
Sbjct: 557 DLRSSNQHVS 566
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.5 bits (73), Expect = 0.026
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
A+G + +WDL + + + HS +I G T +++GSRD TV+VW
Sbjct: 163 ASGADDSRVRLWDLNSSRSMAVFEGHSSVIR------GLTFEPTGSFLLSGSRDKTVQVW 216
Query: 494 DPRQR 508
+ ++R
Sbjct: 217 NIKKR 221
Score = 29.9 bits (64), Expect = 0.32
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
ATG G ++VWD+ + + H +I+++ G N + +G+ D V++W
Sbjct: 119 ATGGAEGLVKVWDIAGAYVTHSFRGHGGVISAL--CFGKHQNTWV--LASGADDSRVRLW 174
Query: 494 D 496
D
Sbjct: 175 D 175
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 362 GSQVY-ITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
G+QV+ + + H+DI+ ++D + TG++D TV++W+
Sbjct: 353 GTQVFGVLEGHTDIVLTLDSSEDGVW------LATGAKDNTVRLWN 392
Score = 26.2 bits (55), Expect = 3.9
Identities = 30/105 (28%), Positives = 45/105 (42%)
Frame = +2
Query: 278 TFGASSDIERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEI 457
TF ASS +R + L D + V+ K H +N+I + I
Sbjct: 428 TFLASSSQDRTLKRFNLGSQLNKSDFSNRA-VWTIKAHDRDVNAIQ------VSKDGRII 480
Query: 458 VTGSRDGTVKVWDPRQRGKPVANMQPMQGETRRDCWAVGFGNSFN 592
+ S+D T+K+WD G+ V ++G RR WA F N F+
Sbjct: 481 ASASQDKTIKLWD-SSTGEVVG---VLRGH-RRGVWACSF-NPFS 519
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 33.5 bits (73), Expect = 0.026
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 332 GTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
G L VW+ + S V + H D ++++ + I+TG+ DG +KVWD
Sbjct: 319 GQLLVWEWQSESYVLKQQSHYDALSTLQ------YSSDGQRIITGADDGKIKVWD 367
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 32.7 bits (71), Expect = 0.045
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQ-----VYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDG 478
A G + G + +WDL +G I+ H + + I + +N IVT S DG
Sbjct: 260 AGGAYNGQVFLWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSN----NIVTCSTDG 315
Query: 479 TVKVWDPRQRGKP 517
V +W+P +P
Sbjct: 316 LVHIWEPDMFSRP 328
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 311 FATGDFRGTLEVWDLEKGSQVYITKEHSD 397
FA+ D G L +WDL+K + +T + D
Sbjct: 479 FASVDALGNLNLWDLQKDVEAPVTSDIPD 507
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.060
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
TG T WD+E+ + + K H I S+D + N VTG D K+WD
Sbjct: 122 TGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPN-----LFVTGGCDKLAKLWD 176
Query: 497 PR 502
R
Sbjct: 177 LR 178
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 31.9 bits (69), Expect = 0.079
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
A+G + T+ +W+L QV + + HS + + C ++++GS D T+++W
Sbjct: 287 ASGSYDATIRLWNLATFQQVALLEGHSSGVTCL-----QFDQC---KLISGSMDKTIRIW 338
Query: 494 DPR 502
+ R
Sbjct: 339 NYR 341
Score = 30.7 bits (66), Expect = 0.18
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 308 RFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVK 487
R +G G ++VW E V+ K HS+ + S+ +G +C E+V+GS DG +
Sbjct: 486 RLISGAHDGVVKVW--EACECVHTLKNHSEPVTSV-ALG----DC---EVVSGSEDGKIY 535
Query: 488 VW 493
+W
Sbjct: 536 LW 537
Score = 30.3 bits (65), Expect = 0.24
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 332 GTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRG 511
GT++ WD+EK V+ H I+G+ + +++G+ DG VKVW+ +
Sbjct: 454 GTIKQWDIEKKKCVHTLFGH------IEGVWEIAAD--HLRLISGAHDGVVKVWEACECV 505
Query: 512 KPVAN-MQPMQGETRRDCWAV 571
+ N +P+ DC V
Sbjct: 506 HTLKNHSEPVTSVALGDCEVV 526
Score = 26.6 bits (56), Expect = 3.0
Identities = 25/110 (22%), Positives = 50/110 (45%)
Frame = +2
Query: 164 IVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLE 343
++ GS+ K TI I+ E I ++S C TF ++ +G T++
Sbjct: 326 LISGSMDK---TIRIWNYRTSECISILH-GHTDSVLCLTFDSTL-----LVSGSADCTVK 376
Query: 344 VWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
+W G ++ + + H+ +NS+ + +++GS D T+K+W
Sbjct: 377 LWHFSGGKRITL-RGHTGPVNSVRIIRDRGL------VLSGSDDSTIKIW 419
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+G T+++W LE + ++ H + S+ +C S DGT+K WD
Sbjct: 409 SGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSC--------SLDGTIKQWD 460
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 30.7 bits (66), Expect = 0.18
Identities = 23/107 (21%), Positives = 47/107 (43%)
Frame = +2
Query: 311 FATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKV 490
FA+ GT++VW + + H +N ++ P ++T D +KV
Sbjct: 157 FASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDK----PYLITAGDDNLIKV 212
Query: 491 WDPRQRGKPVANMQPMQGETRRDCWAVGFGNSFNDSERIVVAGYDNG 631
WD + + A ++ ++G T +A F+ I+++G ++G
Sbjct: 213 WDYQTK----ACVRILEGHTNNVSFAF-----FHSKFPIIISGSEDG 250
Score = 30.3 bits (65), Expect = 0.24
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 338 LEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
++VWD + + V I + H++ ++ + P I++GS DGTVK+W
Sbjct: 210 IKVWDYQTKACVRILEGHTNNVSFA------FFHSKFPIIISGSEDGTVKIW 255
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 30.7 bits (66), Expect = 0.18
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 437 NCGAPEIVTGSRDGTVKVWDPR 502
+C + T S DGTVKVWD R
Sbjct: 92 HCDGKWLATSSEDGTVKVWDMR 113
Score = 26.2 bits (55), Expect = 3.9
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 188 GSGTIEIFEINAGEIKKIKEIE-RSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKG 364
G+ + +++IN + E +N+ F + AT GT++VWD+ +
Sbjct: 59 GNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDG---KWLATSSEDGTVKVWDM-RA 114
Query: 365 SQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
V +H +N + + E+++ + G V+ WD
Sbjct: 115 PSVQRNYDHKSPVNDL------LIHPNQGELLSCDQSGRVRAWD 152
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 30.7 bits (66), Expect = 0.18
Identities = 30/115 (26%), Positives = 54/115 (46%)
Frame = +2
Query: 152 SAKFIVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFR 331
+ +FIV GS G T ++++ G+ I ++E N T A S ++ A G
Sbjct: 413 NGRFIVSGS---GDRTARLWDVETGQC--ILKLEIENGV---TAIAISPNDQFIAVGSLD 464
Query: 332 GTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+ VW + G+ V + H + + SI ++ +++GS D T+KVW+
Sbjct: 465 QIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSI------LLSGSLDKTIKVWE 512
Score = 29.9 bits (64), Expect = 0.32
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
Frame = +2
Query: 110 NLNHSLFDCKWIPCSAKFIVLGS-LPKGSG-TIEIFEINAGE-IKKIKEI--ERSNSFKC 274
NL H+L + + C KF G L G +F++ G+ + + E + S
Sbjct: 305 NLVHTL-EHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYV 363
Query: 275 GTFGASSDIERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPE 454
T S D + TG +++WDL Y+ H I S+D +
Sbjct: 364 RTIAFSPD-GKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLD------FSHNGRF 416
Query: 455 IVTGSRDGTVKVWDPRQRGKPVANMQPMQGET 550
IV+GS D T ++WD + G+ + ++ G T
Sbjct: 417 IVSGSGDRTARLWDV-ETGQCILKLEIENGVT 447
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.9 bits (64), Expect = 0.32
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 308 RFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIV 460
+ A G G + +WD+E V K HS+ + ++ T+ G E++
Sbjct: 180 QLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAWNDNTLTSGGKDEVI 230
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 29.9 bits (64), Expect = 0.32
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 302 ERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGT 481
+ RFA+ G + V+D + G QVY H I SI + + + + VT S +
Sbjct: 201 DERFASAGADGKVYVFDGKTGDQVYEIDAHKGSIFSI------SWSPDSSQFVTSSAGYS 254
Query: 482 VKVWD 496
K+WD
Sbjct: 255 CKIWD 259
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +2
Query: 359 KGSQVYITKEHSDIINSIDG----MGGNTTNCGAPEIVTGSRDGTVKVWD-PRQRGKPV 520
KG+ Y+ +I++I G + T + A T S DGTV WD +Q+ P+
Sbjct: 294 KGNLTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSWDIGKQKAFPL 352
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 29.5 bits (63), Expect = 0.42
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
TG + T VW L G Y+ K H + ++ +G + +TGS D +K+W+
Sbjct: 114 TGSWDSTARVWAL--GQCKYVLKGHQSSVWAVLALGEDI-------FITGSADKLIKIWN 164
Query: 497 PRQRGKPV 520
+ K +
Sbjct: 165 GEKLVKSI 172
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 29.5 bits (63), Expect = 0.42
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 458 VTGSRDGTVKVWDPRQRGKPVANMQPMQGETRRDCWAVGFGNSFNDSERIVV 613
VTG DG VKVWD R + N M A+ +G D+ ++ V
Sbjct: 562 VTGGSDGIVKVWDLRLNNPFIQNFTEMNS-------AITYGGFSEDASKLTV 606
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 29.1 bits (62), Expect = 0.56
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
AT ++ + D++ GS + H+ + ++D N + +GS DGT ++W
Sbjct: 163 ATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEF-----VLASGSADGTCRLW 217
Query: 494 DPRQRGKPVANM 529
D R+ A M
Sbjct: 218 DIRKVSSSFACM 229
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 29.1 bits (62), Expect = 0.56
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 245 EIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGSQ---VYITKEHSDIINSID 415
E ++ S +C T FA+G G + VW L++ S + I K H
Sbjct: 281 ESDKGTSTQCITHQPLPGSTPSFASGTENGVINVWRLDEDSNDNSMGIIKPHLTFYGHEG 340
Query: 416 GMGGNTTNCGAPEIVTGSRDGTVKVW 493
+ I +G DGT++ W
Sbjct: 341 PVLCVCVPKATHHIFSGGHDGTIRCW 366
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 29.1 bits (62), Expect = 0.56
Identities = 17/101 (16%), Positives = 41/101 (40%)
Frame = +2
Query: 194 GTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGSQV 373
G + +++ + ++ + +S + S R + G +++WD+ +
Sbjct: 1155 GVLRVYDKRLPARDSLTDVWKEHSSEIVNVEMQSSGMRELISASSDGEVKLWDIRMNHSL 1214
Query: 374 YITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+ + S+ T + AP TGS + ++K+WD
Sbjct: 1215 QTFSTDNSGLTSL------TVHSHAPVYATGSSNQSIKIWD 1249
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 320 GDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDP 499
GD R + +WD K ++ NSI + + C IV G DG ++V+D
Sbjct: 1108 GDVR-VIRIWDASK--EICYANLPVRSSNSITSLTSDLVGCNI--IVAGFSDGVLRVYDK 1162
Query: 500 R 502
R
Sbjct: 1163 R 1163
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.1 bits (62), Expect = 0.56
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 152 SAKFIVLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFR 331
+ KFIV GS TI IFE ++G++ ++ + + + F + + +G +
Sbjct: 398 NGKFIVSGS---SDLTIRIFEASSGKLLRMLQ-GHEDLIRTVRFN-----DEKIVSGGYD 448
Query: 332 GTLEVWDLEKGSQ 370
GT+ +W+ G Q
Sbjct: 449 GTVRIWNFNTGEQ 461
Score = 28.7 bits (61), Expect = 0.74
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 335 TLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
T+ +++ G + + + H D+I T +IV+G DGTV++W+
Sbjct: 410 TIRIFEASSGKLLRMLQGHEDLIR--------TVRFNDEKIVSGGYDGTVRIWN 455
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 455 IVTGSRDGTVKVWDPRQR 508
+V+GS+D TV VWD R
Sbjct: 234 MVSGSKDRTVSVWDVNSR 251
>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
E3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.56
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 167 VLGSLPKGSGTIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEV 346
+LG+ +G I + + E + + + F + + FA +L++
Sbjct: 59 ILGA-GSSTGNISLLSVKHPEFQAVVTPGYARPCNSLAFSETEHLVAGFAKSRNESSLKL 117
Query: 347 WDLEKGSQVYITKEHSDIINS--IDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRGKPV 520
WDL + + + S ++ S +DG+ P ++TGS +V + D RQ+ V
Sbjct: 118 WDL---NSLLSDPKSSPLMQSSTLDGVSSVCYKKDTPLLLTGSTSRSVHIIDTRQQLDSV 174
Query: 521 ANM 529
+++
Sbjct: 175 SSV 177
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 28.7 bits (61), Expect = 0.74
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 356 EKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQRGKPVANMQP 535
+K S++Y +I+ S G N+ +TG DG +++W+ R + A ++
Sbjct: 2420 DKLSRIYNENSDENILCSCFYTGANSEWLHKNLFITGHPDGIIRIWEKRLQSN--AKLEA 2477
Query: 536 MQGETRRDCW 565
+ R W
Sbjct: 2478 EKNNADRPKW 2487
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 0.74
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 344 VWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
+WD+ G Q+ H D I +ID T I TG D V++W
Sbjct: 88 IWDITTGEQICQLTGHKDSIVAIDWSFDGT------YIATGGMDSQVRLW 131
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 0.97
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 338 LEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPR 502
+ ++D + G + +EH + + + +G +VTGS D TV+VWD R
Sbjct: 428 INIYDTKTGVLIRSLEEHEGDVWTFEYVGDT--------LVTGSTDRTVRVWDLR 474
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/60 (20%), Positives = 27/60 (45%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+ + GTL VW G +++ + H + S+ T N + ++ D +++W+
Sbjct: 592 SASYDGTLRVWKASTGVCLHVLRGHVGRVYSV------TINPSRQQCISAGTDAKIRIWN 645
Score = 27.1 bits (57), Expect = 2.3
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 18/77 (23%)
Frame = +2
Query: 317 TGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGN--TT----------------NC 442
TG T+ VWDL G + H+ I I + GN TT N
Sbjct: 461 TGSTDRTVRVWDLRTGECKQVFYGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDANS 520
Query: 443 GAPEIVTGSRDGTVKVW 493
P I++ SRD T+++W
Sbjct: 521 MPPYIISSSRDCTIRLW 537
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 338 LEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
+ +W+LE G + HS++++ + + AP D +++VWD
Sbjct: 641 IRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPP------DTSLRVWD 687
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.3 bits (60), Expect = 0.97
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 233 KKIKEIERS-NSFKCGTFGASSDIERRFATGDFRGTLEVWDLEKGSQVYITKEHSDIINS 409
KK K+I S ++ ++ + +G TL++WDL + V HSD ++
Sbjct: 243 KKSKKINDSYHTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKSFTYHSDKVSC 302
Query: 410 IDGMGGNTTNCGAPEI-VTGSRDGTVKVWDPRQRGKP 517
+D AP + ++GS D T K+ D R P
Sbjct: 303 LDWYS------KAPSVLLSGSYDKTAKIADLRLEEAP 333
Score = 27.1 bits (57), Expect = 2.3
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLE-------------KGSQVYITKEHSDIINS---IDGMGGNTTNCG 445
A G F +E+WDL+ SQV K+ S IN D + ++N
Sbjct: 206 AVGTFDPEIEIWDLDIIDAVYPAAVLGAGASQVNKKKKKSKKINDSYHTDAVLALSSNRN 265
Query: 446 APE-IVTGSRDGTVKVWD 496
A +V+GS D T+K+WD
Sbjct: 266 AHNLLVSGSADTTLKLWD 283
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINS-IDGMGGNTTNCGAPEIV--TGSRDGTV 484
A+G G +++WD + + + +K H I+ + G+ +C + V +DG V
Sbjct: 81 ASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFSNQGDVLSCASDRYVYMLNKQDGKV 140
Query: 485 K 487
K
Sbjct: 141 K 141
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 452 EIVTGSRDGTVKVWDPRQR 508
+ +GS DG VK+WD +R
Sbjct: 79 DCASGSGDGAVKLWDASER 97
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 335 TLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
+++VW L++ S + H D+I +D + C + G RD T ++W
Sbjct: 273 SIKVWSLDQMSYIETLFGHQDVIFGVDALA--RERC----VSVGGRDRTSRLW 319
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 374 YITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWDPRQR 508
Y S II+ + T + A +++G +DG V VWD R
Sbjct: 284 YNDSRESSIISCQSPITTLTVSFDASLLISGDKDGNVLVWDSVSR 328
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 9/54 (16%)
Frame = +2
Query: 428 NTTNCGAPEIVTGSRDGTVKVWDPRQRG---------KPVANMQPMQGETRRDC 562
N N +V+ SRDG++ WD R G KPV ++ + RDC
Sbjct: 235 NFCNDSPYNLVSCSRDGSIIFWDMRTHGITIDGEHFQKPVLRIRKAHENSGRDC 288
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 27.1 bits (57), Expect = 2.3
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +2
Query: 311 FATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKV 490
F T D G+L V+ ++ + V D NSI + N ++T S D TVK+
Sbjct: 360 FVTSDVEGSLRVYKVDGKAPVSTVSHAHD--NSIVAL---RYNLRISLLLTASSDTTVKL 414
Query: 491 WDPRQRG 511
W G
Sbjct: 415 WSRGDAG 421
>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 208 YFNGTRAFR*RTKYYKFSRTWYPLAI 131
YFN TR R KY+ +++ YP+ I
Sbjct: 85 YFNATRVLIHRLKYHPTTKSKYPIHI 110
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
A G + +++WD ++ +D++ D + + I+T S D T+K+W
Sbjct: 190 ANGGLQKDIQLWDCVSKKRI------TDLVGHTDNVRDILISDDGRTILTASSDATIKLW 243
Query: 494 DPR 502
R
Sbjct: 244 SLR 246
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +2
Query: 311 FATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKV 490
FAT T ++W + +Y + + ++ +D + T + + ++TGS D T ++
Sbjct: 436 FATASHDQTAQLWSCD---HIYPLRVFAGHLSDVDCV---TFHPNSAYVLTGSSDKTCRL 489
Query: 491 WD 496
WD
Sbjct: 490 WD 491
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 3.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 314 ATGDFRGTLEVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
AT T++VWD+ + K HSD ++ + I TGS D TV++W
Sbjct: 348 ATASTDKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQDSF--------IATGSMDTTVRLW 399
Query: 494 D 496
+
Sbjct: 400 N 400
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 449 PEIVTGSRDGTVKVWDPRQR 508
P I TG DG+V+ WD + R
Sbjct: 294 PIIYTGGNDGSVRSWDYKTR 313
>SPAC977.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 550 SLTLHWLHVCNRFTSLPWIPNLYCSISTASYNFRSSTVGCV 428
SLT+ + L + +Y + +AS FRS T GCV
Sbjct: 37 SLTVKYCLAVKLLIYLLYCWYIYSEVPSASSKFRSFTFGCV 77
>SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 550 SLTLHWLHVCNRFTSLPWIPNLYCSISTASYNFRSSTVGCV 428
SLT+ + L + +Y + +AS FRS T GCV
Sbjct: 37 SLTVKYCLAVKLLIYLLYCWYIYSEVPSASSKFRSFTFGCV 77
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 5.2
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +2
Query: 176 SLPKGSG--TIEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTLEVW 349
+L GSG T+ ++++ AGE K I + + F A G + +W
Sbjct: 390 TLVSGSGDRTVCLWDVEAGEQKLI--LHTDDGVTTVMFSPDGQF---IAAGSLDKVIRIW 444
Query: 350 DLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVWD 496
G+ V H + + S+ + +V+GS D T+K+W+
Sbjct: 445 T-SSGTLVEQLHGHEESVYSV------AFSPDGKYLVSGSLDNTIKLWE 486
>SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 550 SLTLHWLHVCNRFTSLPWIPNLYCSISTASYNFRSSTVGCV 428
SLT+ + L + +Y + +AS FRS T GCV
Sbjct: 37 SLTVKYCLAVKLLIYLLYCWYIYSEVPSASSKFRSFTFGCV 77
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 6.9
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Frame = +2
Query: 173 GSLPKGSGT----IEIFEINAGEIKKIKEIERSNSFKCGTFGASSDIERRFATGDFRGTL 340
G L G GT I+++ G + + I+ + S C + E G +
Sbjct: 430 GILASGGGTADRTIKLWNTQRGSM--LHNID-TGSQVCNLLWSKQTNEFISTHGFMENEV 486
Query: 341 EVWDLEKGSQVYITKEHSDIINSIDGMGGNTTNCGAPEIVTGSRDGTVKVW 493
+W+ S+V K H+D + + M N N IVTG+ D T++ W
Sbjct: 487 ALWNYPSVSRVGTLKGHTDRVLYL-AMSPNGEN-----IVTGAADETLRFW 531
>SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 282 NVPHLNELDLSISFIFLIS-PAFISNISMVPEPFGK 178
N+ +N+L +SF L +FIS + ++PEPF K
Sbjct: 155 NLEEINQLKKFLSFRKLYPRQSFISLLQILPEPFLK 190
>SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 491 WDPRQRGKPVANMQPMQGETRRDCWAVGFGNSF 589
WD K +Q +Q E + C ++G GN F
Sbjct: 109 WDNTNVAKVPDTLQWLQRERMQKCSSIGSGNDF 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,501,611
Number of Sequences: 5004
Number of extensions: 50603
Number of successful extensions: 305
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -