Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29m17
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071493-1|AAL49115.1|  192|Drosophila melanogaster RE55690p pro...    76   4e-14
AY071358-1|AAL48980.1|  192|Drosophila melanogaster RE39465p pro...    76   4e-14
AE014296-2714|AAF49479.1|  192|Drosophila melanogaster CG4893-PA...    76   4e-14
AY061400-1|AAL28948.1|  791|Drosophila melanogaster LD32732p pro...    32   0.64 
AE014296-1853|AAF50131.1|  791|Drosophila melanogaster CG6418-PB...    32   0.64 
AY061188-1|AAL28736.1|  321|Drosophila melanogaster LD15209p pro...    30   2.6  
AE014298-898|AAF46166.1|  321|Drosophila melanogaster CG3918-PA ...    30   2.6  
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P...    29   4.5  

>AY071493-1|AAL49115.1|  192|Drosophila melanogaster RE55690p
           protein.
          Length = 192

 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +3

Query: 543 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKK 665
           GD KSDGK ITLSQSDKWMKQAKVID KKITTTDT IHFKK
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIHFKK 87


>AY071358-1|AAL48980.1|  192|Drosophila melanogaster RE39465p
           protein.
          Length = 192

 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +3

Query: 543 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKK 665
           GD KSDGK ITLSQSDKWMKQAKVID KKITTTDT IHFKK
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIHFKK 87


>AE014296-2714|AAF49479.1|  192|Drosophila melanogaster CG4893-PA
           protein.
          Length = 192

 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +3

Query: 543 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKK 665
           GD KSDGK ITLSQSDKWMKQAKVID KKITTTDT IHFKK
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIHFKK 87


>AY061400-1|AAL28948.1|  791|Drosophila melanogaster LD32732p
           protein.
          Length = 791

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +3

Query: 243 GKATAGSISAATKSASLKRLSATDSLA*YMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQ 422
           G A+ G ++ +T S S    S  DS++ Y  +++   K   RK  T+    D   E   +
Sbjct: 46  GGASRGGVTGSTTSTSKHGYSTLDSISQYTNATNLVGK---RKHHTDDDYFDDDDEPREK 102

Query: 423 EVKDVKLENGNAPGASNGTSSKSEDN 500
           E++   +    +PGA   ++ K ED+
Sbjct: 103 EIEQAYIPAPGSPGAPPTSAKKQEDS 128


>AE014296-1853|AAF50131.1|  791|Drosophila melanogaster CG6418-PB
           protein.
          Length = 791

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +3

Query: 243 GKATAGSISAATKSASLKRLSATDSLA*YMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQ 422
           G A+ G ++ +T S S    S  DS++ Y  +++   K   RK  T+    D   E   +
Sbjct: 46  GGASRGGVTGSTTSTSKHGYSTLDSISQYTNATNLVGK---RKHHTDDDYFDDDDEPREK 102

Query: 423 EVKDVKLENGNAPGASNGTSSKSEDN 500
           E++   +    +PGA   ++ K ED+
Sbjct: 103 EIEQAYIPAPGSPGAPPTSAKKQEDS 128


>AY061188-1|AAL28736.1|  321|Drosophila melanogaster LD15209p
           protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +3

Query: 432 DVKLENGNAPGASNGTSSKSEDNALXXXXXXXXXXXXGDP-KSDGKAITLSQSDKWMKQA 608
           D    + ++  +S+ TSS S  ++              +   SD +  + S+SD++ ++ 
Sbjct: 210 DSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSSDSSESDSSDNEESSTSESDEYGRKK 269

Query: 609 KVIDGKKITTTDTA-IHFKKTQIGKTRHR 692
           K     K  +TDTA +  KKT+  + RHR
Sbjct: 270 KRQGKYKRKSTDTAMLRRKKTKAKRKRHR 298


>AE014298-898|AAF46166.1|  321|Drosophila melanogaster CG3918-PA
           protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +3

Query: 432 DVKLENGNAPGASNGTSSKSEDNALXXXXXXXXXXXXGDP-KSDGKAITLSQSDKWMKQA 608
           D    + ++  +S+ TSS S  ++              +   SD +  + S+SD++ ++ 
Sbjct: 210 DSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSSDSSESDSSDNEESSTSESDEYGRKK 269

Query: 609 KVIDGKKITTTDTA-IHFKKTQIGKTRHR 692
           K     K  +TDTA +  KKT+  + RHR
Sbjct: 270 KRQGKYKRKSTDTAMLRRKKTKAKRKRHR 298


>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
           isoform A protein.
          Length = 1788

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 366 RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTS 482
           RK+  + +NT A ++Q  +E++D    NG +  ASN TS
Sbjct: 505 RKVRGKRRNTIAGIDQ--KEIQDAANGNGESKNASNATS 541


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,664,894
Number of Sequences: 53049
Number of extensions: 573710
Number of successful extensions: 2200
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)