Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29m13
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-13|CAA91355.1| 184|Caenorhabditis elegans Hypothetical p... 38 0.006
Z48638-11|CAA88572.1| 184|Caenorhabditis elegans Hypothetical p... 38 0.006
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 34 0.091
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 34 0.091
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 34 0.12
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 32 0.37
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 32 0.37
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 32 0.37
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 32 0.48
AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical ... 31 0.85
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 30 1.5
AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 30 2.0
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.6
L10986-12|AAA28011.1| 197|Caenorhabditis elegans Hypothetical p... 29 2.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.6
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.4
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC024791-34|AAF60670.2| 440|Caenorhabditis elegans Hypothetical... 29 4.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 4.5
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical p... 28 7.9
Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical p... 28 7.9
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 28 7.9
U88315-8|AAN84845.1| 472|Caenorhabditis elegans Nematode astaci... 28 7.9
U88315-7|AAL16314.1| 546|Caenorhabditis elegans Nematode astaci... 28 7.9
U88315-6|AAB42372.1| 517|Caenorhabditis elegans Nematode astaci... 28 7.9
AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z66515-13|CAA91355.1| 184|Caenorhabditis elegans Hypothetical
protein R53.8 protein.
Length = 184
Score = 38.3 bits (85), Expect = 0.006
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +3
Query: 216 VGQNLEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLK--AMAKEQ 389
V QN IV K + +EK D +A K+ EKE+ I + K +LK + +
Sbjct: 56 VPQNTTKIVIKFDKPILAEIEKS-SDFEANFEAKVFEKESKIVKLKAKGELKKPVIVSIK 114
Query: 390 XXXXXXXXXXXXXTGTAESKDAIKSDKKPEMQAGSQQVK-KVEAKPQQQP 536
ES D K D++ + Q G ++ K KV KP++QP
Sbjct: 115 DKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDGDKKDKEKVSEKPKEQP 164
>Z48638-11|CAA88572.1| 184|Caenorhabditis elegans Hypothetical
protein R53.8 protein.
Length = 184
Score = 38.3 bits (85), Expect = 0.006
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +3
Query: 216 VGQNLEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLK--AMAKEQ 389
V QN IV K + +EK D +A K+ EKE+ I + K +LK + +
Sbjct: 56 VPQNTTKIVIKFDKPILAEIEKS-SDFEANFEAKVFEKESKIVKLKAKGELKKPVIVSIK 114
Query: 390 XXXXXXXXXXXXXTGTAESKDAIKSDKKPEMQAGSQQVK-KVEAKPQQQP 536
ES D K D++ + Q G ++ K KV KP++QP
Sbjct: 115 DKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDGDKKDKEKVSEKPKEQP 164
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 34.3 bits (75), Expect = 0.091
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDA 455
E+K + + E+ +K+ EKE +K +EKA KA KE+ TG+ SK+A
Sbjct: 223 EEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEK-NNGTMDKFLKKDTGSPSSKNA 281
Query: 456 -IKSDKKPEMQAGSQQVKKVEAKPQQQPAKKVDTNVKM 566
+ S K G +++ V K + K+ D VKM
Sbjct: 282 PLFSPSK----WGEKRI-AVGVKKMEDAWKRRDLEVKM 314
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.091
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDA 455
E+K + + E+ +K+ EKE +K +EKA KA KE+ TG+ SK+A
Sbjct: 259 EEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEK-NNGTMDKFLKKDTGSPSSKNA 317
Query: 456 -IKSDKKPEMQAGSQQVKKVEAKPQQQPAKKVDTNVKM 566
+ S K G +++ V K + K+ D VKM
Sbjct: 318 PLFSPSK----WGEKRI-AVGVKKMEDAWKRRDLEVKM 350
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDA 455
E+K + + E+ +K+ EKE +K +EKA KA KE+ TG+ SK+A
Sbjct: 259 EEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEK-NNGTMDKFLKKDTGSPSSKNA 317
Query: 456 -IKSDKKPEMQAGSQQVKKVE 515
+ S K + + VKK+E
Sbjct: 318 PLFSPSKWGEKRIAVGVKKME 338
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 225 NLEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAK 383
N + VSK D ++ LE+K++D +++++ E EA++K+A+ K KA K
Sbjct: 608 NHQRAVSKGFDESMQKLEQKIKD----KKKEVKEAEAALKSARGAEKEKAQKK 656
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 225 NLEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAK 383
N + VSK D ++ LE+K++D +++++ E EA++K+A+ K KA K
Sbjct: 680 NHQRAVSKGFDESMQKLEQKIKD----KKKEVKEAEAALKSARGAEKEKAQKK 728
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 225 NLEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAK 383
N + VSK D ++ LE+K++D +++++ E EA++K+A+ K KA K
Sbjct: 680 NHQRAVSKGFDESMQKLEQKIKD----KKKEVKEAEAALKSARGAEKEKAQKK 728
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/98 (26%), Positives = 44/98 (44%)
Frame = +3
Query: 258 SFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGT 437
SF +G EK D ++ K EK+ K ++ K +A +E+
Sbjct: 130 SFKKGDEKGDEKKDEKKEEKKEEKKEEKKEDKKDDKKEAKKEEKKEEKKEEKKE------ 183
Query: 438 AESKDAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKKVD 551
E K+ K +KK E +++ KK E K +++ KKV+
Sbjct: 184 -EKKEEKKEEKKEEKNDENKEEKKEEKKDEKKEEKKVE 220
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 207 HGKVGQNLEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKL 368
H ++ LE V TVD + LEKKL DMDA+ K +KE K ++ ++
Sbjct: 270 HDELVDCLEETVGGTVDE-LEKLEKKLLDMDAKIVDKFRDKEKVEKFVRDHERI 322
>AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical
protein Y5H2B.3 protein.
Length = 182
Score = 31.1 bits (67), Expect = 0.85
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +3
Query: 300 AEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDAIKSDKKPE 479
A++ K HE+EA +EK++ K AKEQ + K+++K +
Sbjct: 84 AKKEHKEHEQEAKDLIKKEKSEQKKEAKEQ---------VNKEKSEEKKKESVKRKSSEK 134
Query: 480 MQAGSQQVKKVEAKPQQQPAKKVDTNVK 563
++A S++ K E + Q KK T K
Sbjct: 135 LEAPSKKAKNSEDQENQVAIKKKVTPPK 162
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +3
Query: 303 EERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDAIKSD--KKP 476
EE +K EK+ K +EK K KE+ G + D K D KK
Sbjct: 93 EEEKKEEEKKKEEKKEEEK---KEEVKEEEKKDDSKRDEKKKDGEKKEDDENKEDNEKKK 149
Query: 477 EMQAGSQQVKKVEAKPQQQ 533
E + ++ KK E PQ+Q
Sbjct: 150 EEKKEDEKPKKEEIVPQEQ 168
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 447 KDAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKK 545
KDA K KK + + Q+ +K KP+QQPA +
Sbjct: 70 KDAAKRKKKSKDKKKKQKAQKKAEKPKQQPASE 102
>AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical
protein T01A4.3 protein.
Length = 710
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 246 KTVDSFIRGLEKKLRDM--DAEERRKIHEKEASIKTAQEKAKLK 371
K +++ I+ LEKK+ D +A ++K E++ +++ QEK K K
Sbjct: 8 KKLETVIKNLEKKIEDQKANAGTKKKEAEQKENLRIEQEKIKKK 51
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = +3
Query: 321 HEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDAIKSDKKPE-MQAGSQ 497
HE E S +T+ +K K E+ + T E K +K +K PE ++
Sbjct: 1517 HESEES-RTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPA 1575
Query: 498 QVKKVEAKPQQ--QPAKKVDTNVK 563
K E P++ P KK + VK
Sbjct: 1576 SPTKKEKSPEKPASPTKKSENEVK 1599
>L10986-12|AAA28011.1| 197|Caenorhabditis elegans Hypothetical
protein F10E9.1 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 545 FFSRLLLRFGFYLFNLLTSSLHFRLLVTFYC 453
FFS +R Y+F+ +T S+ F L + F+C
Sbjct: 45 FFSAWFIRAAGYIFSGITVSIAFLLSIAFFC 75
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = +3
Query: 321 HEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDAIKSDKKPE-MQAGSQ 497
HE E S +T+ +K K E+ + T E K +K +K PE ++
Sbjct: 1517 HESEES-RTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPA 1575
Query: 498 QVKKVEAKPQQ--QPAKKVDTNVK 563
K E P++ P KK + VK
Sbjct: 1576 SPTKKEKSPEKPASPTKKSENEVK 1599
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = +3
Query: 321 HEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDAIKSDKKPE-MQAGSQ 497
HE E S +T+ +K K E+ + T E K +K +K PE ++
Sbjct: 1517 HESEES-RTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPA 1575
Query: 498 QVKKVEAKPQQ--QPAKKVDTNVK 563
K E P++ P KK + VK
Sbjct: 1576 SPTKKEKSPEKPASPTKKSENEVK 1599
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = +3
Query: 321 HEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDAIKSDKKPE-MQAGSQ 497
HE E S +T+ +K K E+ + T E K +K +K PE ++
Sbjct: 1517 HESEES-RTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPA 1575
Query: 498 QVKKVEAKPQQ--QPAKKVDTNVK 563
K E P++ P KK + VK
Sbjct: 1576 SPTKKEKSPEKPASPTKKSENEVK 1599
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAK----EQXXXXXXXXXXXXXTGTAE 443
E ++++ + E++RKI E+EA K +E+A+LKA + E+ E
Sbjct: 534 EARIKE-EEEKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELE 592
Query: 444 SKDAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKK 545
K + +KK + ++ K E K +Q+ K+
Sbjct: 593 IKRKAEEEKKKKALEEEKKRKIAEEKARQKQEKE 626
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLK---AMAKE-QXXXXXXXXXXXXXTGTAE 443
EK+ + +A ++ EK+ KT QEKAK + M E Q T T E
Sbjct: 10097 EKQKLESEATSKKPTSEKQKDEKTPQEKAKSENETVMTTEPQQLEVKSEPKKSDKTETVE 10156
Query: 444 SKDAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKKVDTNVKM 566
+ A ++K + + + KK K ++ K + + ++
Sbjct: 10157 KEVASSTEKSDDSKTKEPKEKKKIIKKKKDTTKPQEASKEL 10197
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLK---AMAKE-QXXXXXXXXXXXXXTGTAE 443
EK+ + +A ++ EK+ KT QEKAK + M E Q T T E
Sbjct: 10117 EKQKLESEATSKKPTSEKQKDEKTPQEKAKSENETVMTTEPQQLEVKSEPKKSDKTETVE 10176
Query: 444 SKDAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKKVDTNVKM 566
+ A ++K + + + KK K ++ K + + ++
Sbjct: 10177 KEVASSTEKSDDSKTKEPKEKKKIIKKKKDTTKPQEASKEL 10217
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLK---AMAKE-QXXXXXXXXXXXXXTGTAE 443
EK+ + +A ++ EK+ KT QEKAK + M E Q T T E
Sbjct: 10117 EKQKLESEATSKKPTSEKQKDEKTPQEKAKSENETVMTTEPQQLEVKSEPKKSDKTETVE 10176
Query: 444 SKDAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKKVDTNVKM 566
+ A ++K + + + KK K ++ K + + ++
Sbjct: 10177 KEVASSTEKSDDSKTKEPKEKKKIIKKKKDTTKPQEASKEL 10217
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +3
Query: 270 GLEKK--LRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAE 443
G EKK +D D ++ +K EK+ K +++K + K K+ E
Sbjct: 82 GDEKKEEKKDEDKKDEKKDEEKKDGEKKSEKKDEKKDDKKDDKKDGKKEDEKKDDEKKDE 141
Query: 444 SK------DAIKSDKKPEMQAGSQQVKKVEAKPQQQPAKK 545
K D K DKK E + ++ K EAK + + +KK
Sbjct: 142 EKKDDKKEDDKKGDKKDEKKDDEKKDDKKEAKSKSKKSKK 181
>AC024791-34|AAF60670.2| 440|Caenorhabditis elegans Hypothetical
protein Y47G6A.25 protein.
Length = 440
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 273 LEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQ 389
L++ R++ AE+R+K+ EKE + +K K+K K++
Sbjct: 196 LKELNREIIAEKRQKMSEKEIICRFGSDKFKIKLFKKQK 234
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +3
Query: 243 SKTVD-SFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKL-KAMAKE 386
+ T+D + ++G+E L + AEE KI EK ++ ++++ L +A+ +E
Sbjct: 2425 TSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRRKQESDLAEALLQE 2474
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 243 SKTVD-SFIRGLEKKLRDMDAEERRKIHEKEASI-KTAQEKAKLKAMAKE 386
+ T+D + ++G+E L + AEE KI EK + + QE + +A+ +E
Sbjct: 2483 TSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRRKQESDQAEALLQE 2532
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQXXXXXXXXXXXXXTGTAESKDA 455
E++ + + EE++K +E K A+EK K A E + KDA
Sbjct: 396 ERRTKRKEEEEKKKKDAEEKKKKDAEEKKKKDA---EDEKKKDAGDEKKKDAEDEKKKDA 452
Query: 456 IKSDKKPEMQAGSQQVKKVEAKPQQQPAKK 545
D+K + AG ++ K E K + +K
Sbjct: 453 --GDEKKKKDAGEKKKKDAEEKKKVAEEEK 480
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 217 WDKTWKESFPRRSIVLLGAWKRS*GIW 297
WD W S P S +LLG WK G W
Sbjct: 1152 WDVDW--SRPDDSALLLGVWKYGYGSW 1176
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 240 VSKTVDSFIRGLE-KKLRDMDAEERRKIHEKEASIKTAQEKA-KLKAMAKEQ 389
V + + ++ LE ++LRD +AEERR + E E + A+E+A K+ M + Q
Sbjct: 489 VKREEEKRLKDLEAQRLRDAEAEERRLL-EIEKEKEEAEERAQKISEMMRYQ 539
>Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical
protein C35C5.10b protein.
Length = 318
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = -2
Query: 261 NYRPSWKRFLPS--FVPL 214
NY PSW+RFL S F+PL
Sbjct: 51 NYLPSWQRFLESIVFIPL 68
>Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical
protein C35C5.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = -2
Query: 261 NYRPSWKRFLPS--FVPL 214
NY PSW+RFL S F+PL
Sbjct: 27 NYLPSWQRFLESIVFIPL 44
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
C09G1.2 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 272 APNKTIDRLGNDSFQVLSHFSVKKIQSHWWCHFGFRVLPCNGNRRF 135
+P KT+ R D +HF+VKK + FGF LP R F
Sbjct: 905 SPEKTLVRAEKD----FNHFTVKKKEECLSLSFGFIALPIKKRRPF 946
>U88315-8|AAN84845.1| 472|Caenorhabditis elegans Nematode astacin
protease protein9, isoform c protein.
Length = 472
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 228 LEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQ 389
L G+ S+ V FI+ L+ + + +++R +IH+ S K Q+ + AK++
Sbjct: 81 LAGLNSELV-GFIKSLQSQFGQLSSQQRNEIHDSCRSFKCDQQSPQ-NTQAKQE 132
>U88315-7|AAL16314.1| 546|Caenorhabditis elegans Nematode astacin
protease protein9, isoform b protein.
Length = 546
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 228 LEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQ 389
L G+ S+ V FI+ L+ + + +++R +IH+ S K Q+ + AK++
Sbjct: 155 LAGLNSELV-GFIKSLQSQFGQLSSQQRNEIHDSCRSFKCDQQSPQ-NTQAKQE 206
>U88315-6|AAB42372.1| 517|Caenorhabditis elegans Nematode astacin
protease protein9, isoform a protein.
Length = 517
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 228 LEGIVSKTVDSFIRGLEKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKEQ 389
L G+ S+ V FI+ L+ + + +++R +IH+ S K Q+ + AK++
Sbjct: 155 LAGLNSELV-GFIKSLQSQFGQLSSQQRNEIHDSCRSFKCDQQSPQ-NTQAKQE 206
>AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3c protein.
Length = 726
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKE 386
EKKL M AEE++ ++KE +K +E+ K M K+
Sbjct: 472 EKKLELMKAEEQK--YQKEKEMKEFEEQQKKAMMTKQ 506
>AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3a protein.
Length = 743
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 276 EKKLRDMDAEERRKIHEKEASIKTAQEKAKLKAMAKE 386
EKKL M AEE++ ++KE +K +E+ K M K+
Sbjct: 472 EKKLELMKAEEQK--YQKEKEMKEFEEQQKKAMMTKQ 506
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,245,072
Number of Sequences: 27780
Number of extensions: 231920
Number of successful extensions: 851
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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