Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29m03
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 29 3.8
AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical ... 28 6.6
Z50016-8|CAA90315.1| 393|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 8.7
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 27 8.7
AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical protein
H19N07.2c protein.
Length = 1135
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/167 (18%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +2
Query: 149 MAKTAEADVEKMKILEERIKAPSIWGRVPCGIRFEDLQDRRYEDAVKLLKKHYLPEEVTY 328
+A D+ I+ + I ++W + ++ + DR +E + + ++
Sbjct: 557 VASNHSFDLVDQSIVHDSIPHETVWKHMFTAELYQFVHDRLFEKSAMQKIDMFDSDDEAR 616
Query: 329 RSVKLSEDREGTDEFTHNLRIW-MKDKMSIAAVKEGTDQLVGLLIMRIQEKCAFSRTFSR 505
++ + + R + +F N R+W M D S+ + T +L L C +T +R
Sbjct: 617 QARRDNLRRIKSKKF--NFRLWRMTDSYSL---ERTTQKLTSRLRPSEFIDC---KTDTR 668
Query: 506 IK-ITHNELYTSVMKFYNEVEKPVCIYEALGVRRYFKIYIVALKNRY 643
+ + + T ++F N +E+P+C Y+ +F Y + +++
Sbjct: 669 LDTLLSQDFETIYVEFSNNIERPLCEYDTARDLLFFVKYYDTMTDKF 715
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical protein
H19N07.2b protein.
Length = 1130
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/167 (18%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +2
Query: 149 MAKTAEADVEKMKILEERIKAPSIWGRVPCGIRFEDLQDRRYEDAVKLLKKHYLPEEVTY 328
+A D+ I+ + I ++W + ++ + DR +E + + ++
Sbjct: 557 VASNHSFDLVDQSIVHDSIPHETVWKHMFTAELYQFVHDRLFEKSAMQKIDMFDSDDEAR 616
Query: 329 RSVKLSEDREGTDEFTHNLRIW-MKDKMSIAAVKEGTDQLVGLLIMRIQEKCAFSRTFSR 505
++ + + R + +F N R+W M D S+ + T +L L C +T +R
Sbjct: 617 QARRDNLRRIKSKKF--NFRLWRMTDSYSL---ERTTQKLTSRLRPSEFIDC---KTDTR 668
Query: 506 IK-ITHNELYTSVMKFYNEVEKPVCIYEALGVRRYFKIYIVALKNRY 643
+ + + T ++F N +E+P+C Y+ +F Y + +++
Sbjct: 669 LDTLLSQDFETIYVEFSNNIERPLCEYDTARDLLFFVKYYDTMTDKF 715
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical protein
H19N07.2a protein.
Length = 1133
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/167 (18%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +2
Query: 149 MAKTAEADVEKMKILEERIKAPSIWGRVPCGIRFEDLQDRRYEDAVKLLKKHYLPEEVTY 328
+A D+ I+ + I ++W + ++ + DR +E + + ++
Sbjct: 557 VASNHSFDLVDQSIVHDSIPHETVWKHMFTAELYQFVHDRLFEKSAMQKIDMFDSDDEAR 616
Query: 329 RSVKLSEDREGTDEFTHNLRIW-MKDKMSIAAVKEGTDQLVGLLIMRIQEKCAFSRTFSR 505
++ + + R + +F N R+W M D S+ + T +L L C +T +R
Sbjct: 617 QARRDNLRRIKSKKF--NFRLWRMTDSYSL---ERTTQKLTSRLRPSEFIDC---KTDTR 668
Query: 506 IK-ITHNELYTSVMKFYNEVEKPVCIYEALGVRRYFKIYIVALKNRY 643
+ + + T ++F N +E+P+C Y+ +F Y + +++
Sbjct: 669 LDTLLSQDFETIYVEFSNNIERPLCEYDTARDLLFFVKYYDTMTDKF 715
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 224 GRVPCGIRFEDLQDRRYEDAVKLLKKHYLP 313
G+VP G + + +YE+ K+L+ H LP
Sbjct: 220 GKVPAGDKCKGCHGEKYENVSKILEVHVLP 249
>AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical
protein Y37F4.6 protein.
Length = 384
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 239 GIRFEDLQDRRYEDAVKLLKKH 304
GIR ED+ + YED KLLKK+
Sbjct: 34 GIRKEDVLKQNYEDDRKLLKKN 55
>Z50016-8|CAA90315.1| 393|Caenorhabditis elegans Hypothetical
protein T21C12.2 protein.
Length = 393
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 197 PPISSFFQHQLRLSSPFLSHCIGREPN 117
P ++FF+ R+ FL HC+G +P+
Sbjct: 163 PMPATFFKTLPRVGLNFLDHCVGNQPD 189
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -2
Query: 291 SFTASSY--LLSCKSSNLIPQGTRPQIDG 211
SF A++Y L CK + L P G P+ DG
Sbjct: 260 SFLATTYGPFLDCKQNELKPPGAEPKKDG 288
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 245 RFEDLQDRRYEDAVKLLKKHYLPEEVTYRSVKLSEDREGTDEFTHNLRIWMKDKMSIAAV 424
+ +++ RR + ++L+ HY E+ + K +++RE D F +++ DK +
Sbjct: 17 KLSEIKQRRVTELKEILRVHYEKEKENEKIEKENKERE-RDNFQLR-KLFPNDKTVFSEY 74
Query: 425 KEGTDQL 445
KE D L
Sbjct: 75 KEVGDML 81
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -2
Query: 291 SFTASSY--LLSCKSSNLIPQGTRPQIDG 211
SF A++Y L CK + L P G P+ DG
Sbjct: 260 SFLATTYGPFLDCKQNELKPPGAEPKKDG 288
>AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical
protein Y24D9A.2 protein.
Length = 568
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 158 TAEADVEKMKILEERIKAPSIWGRVPCGIRFEDLQDRRYEDAVKLLK 298
+A+ E +++++ KAP +P +R+ Q Y D +LLK
Sbjct: 59 SADKTSEMLRVIKFAFKAPPFKLELPVYLRYSSYQLSSYRDRCQLLK 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,486,264
Number of Sequences: 27780
Number of extensions: 338301
Number of successful extensions: 885
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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