Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29m02
         (674 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23AT6 Cluster: Putative uncharacterized protein; n=2; ...    36   0.90 
UniRef50_Q4JXY9 Cluster: Putative membrane protein precursor; n=...    36   1.2  
UniRef50_Q23C31 Cluster: Putative uncharacterized protein; n=4; ...    36   1.2  
UniRef50_Q23AT7 Cluster: Putative uncharacterized protein; n=5; ...    34   3.6  
UniRef50_Q238Q5 Cluster: Putative uncharacterized protein; n=2; ...    34   3.6  
UniRef50_Q5WCW6 Cluster: Fe3+ ABC transporter permease; n=1; Bac...    33   4.8  
UniRef50_Q2JHP1 Cluster: Xanthine dehydrogenase accessory factor...    33   6.3  
UniRef50_Q9C246 Cluster: Putative uncharacterized protein B18D24...    33   6.3  
UniRef50_A0BPN4 Cluster: Chromosome undetermined scaffold_12, wh...    33   8.4  

>UniRef50_Q23AT6 Cluster: Putative uncharacterized protein; n=2;
            Alveolata|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 1428

 Score = 35.9 bits (79), Expect = 0.90
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
 Frame = +1

Query: 358  LLGISLLVFYAIGISVYRHQGLIFVNCNDT-RPYSQVFYHQIVSAETYFPFSSY------ 516
            L+ ISL+ F +IG   +    LI  N ND     S +FY   ++ + +    ++      
Sbjct: 1244 LITISLICFLSIGF--FSISNLIIKNFNDIFNQPSLIFYQSSLAVQNFLQLKAFSQILSN 1301

Query: 517  YGYLSNMVTQYPDLRLNWFFLIDDSQQYTFNKLV 618
            Y Y++   T +P ++LN  F +   Q Y   + +
Sbjct: 1302 YRYITQFQTDFPIVKLNQTFELFKQQNYQVQQFI 1335


>UniRef50_Q4JXY9 Cluster: Putative membrane protein precursor; n=1;
           Corynebacterium jeikeium K411|Rep: Putative membrane
           protein precursor - Corynebacterium jeikeium (strain
           K411)
          Length = 1199

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 322 PEL-FSACWMTFILLGISLLVFYAIGISVYRHQGLIFVN 435
           P+L F+ CW+T +LLG++ +VF    IS     G IF++
Sbjct: 328 PQLPFARCWLTILLLGVAAMVFATAPISPLASWGRIFLD 366


>UniRef50_Q23C31 Cluster: Putative uncharacterized protein; n=4;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 886

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = +1

Query: 385  YAIGISVYRHQG-LIFVNCNDTRPYSQVFYHQIVSAETYFPFSSYYGYLSNMVTQYPDLR 561
            Y + +  Y  Q  LIF N + +  YS      I     Y+  ++     +N+ +QY    
Sbjct: 786  YQLDLVFYFAQSFLIFFNISPSLVYSYQIQQMI--GNLYY-INNQDKVANNLFSQYTKYN 842

Query: 562  LNWFFLIDDSQQYTFNKLVQTRKTN---VFEKNNRR 660
            LN  F I +S QY+ N++ Q  + N    + +NN+R
Sbjct: 843  LNNIFQIQNSPQYSLNQIQQNSQLNQNYKYNQNNQR 878


>UniRef50_Q23AT7 Cluster: Putative uncharacterized protein; n=5;
            Eukaryota|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 2887

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
 Frame = +1

Query: 358  LLGISLLVFYAIGISVYRHQGLIFVNCNDT-RPYSQVFYHQIVSAETYFPFSSY------ 516
            L+ ISL+ F +IG   +    L+  N  DT    S +FY   ++ + +    ++      
Sbjct: 2703 LITISLICFLSIGF--FSVSNLLIKNFTDTFNQPSLIFYQSSLAVQNFLQMKAFSQILSN 2760

Query: 517  YGYLSNMVTQYPDLRLNWFFLIDDSQQYTFNKLV 618
            Y Y++   T +P ++LN  F   + Q Y   + +
Sbjct: 2761 YRYITQFQTDFPIVKLNQTFEHFNQQNYQVQQFI 2794


>UniRef50_Q238Q5 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1818

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
 Frame = +1

Query: 358  LLGISLLVFYAIGISVYRHQGLIFVNCNDT-RPYSQVFYHQIVSAETYFPFSSYYGYLSN 534
            L+ ISL+ F +IG   +    L+  N NDT    S +FY   ++ + +    ++   LSN
Sbjct: 1108 LITISLICFLSIGF--FSVSNLLIKNFNDTFNQRSLIFYQSSLAIQNFLQMKAFSQILSN 1165

Query: 535  M--VTQY----PDLRLNWFFLIDDSQQYTFNKLV 618
               +TQ+    P ++LN  F   + Q Y   + +
Sbjct: 1166 YRYITQFQKDFPIVKLNQTFEHFNQQNYQVQQFI 1199


>UniRef50_Q5WCW6 Cluster: Fe3+ ABC transporter permease; n=1;
           Bacillus clausii KSM-K16|Rep: Fe3+ ABC transporter
           permease - Bacillus clausii (strain KSM-K16)
          Length = 552

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 13/39 (33%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = +1

Query: 274 GWTIASGRKHSWLNRWP-ELFSACWMTFILLGISLLVFY 387
           G+ + +   H +L+RWP ++ +A  ++F+LLG+ + V+Y
Sbjct: 219 GYPVFTTEIHQYLSRWPVDIPAATSLSFVLLGVCMAVWY 257


>UniRef50_Q2JHP1 Cluster: Xanthine dehydrogenase accessory factor,
           putative; n=2; Synechococcus|Rep: Xanthine dehydrogenase
           accessory factor, putative - Synechococcus sp. (strain
           JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
           B-Prime)
          Length = 287

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +1

Query: 214 DAGGGDSCVGPQAPLTTVSPGWTIASGRKHSWLNRW 321
           D  G  S  G Q  L   SP   +  GR H WL RW
Sbjct: 64  DGDGESSPAGMQVSLDLNSPPLGVCGGRMHIWLQRW 99


>UniRef50_Q9C246 Cluster: Putative uncharacterized protein
           B18D24.280; n=4; Sordariomycetes|Rep: Putative
           uncharacterized protein B18D24.280 - Neurospora crassa
          Length = 1091

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 415 QGLIFVNCNDTRPYSQVFYHQIVSAETYFPFSSYYGYL-SNMVTQYPDLRLNWFF 576
           QG++  + +D +P+ Q +   I SA T+ P  S  G+L S ++  YP   + W +
Sbjct: 354 QGVLVASNHDVQPFIQTYRKVITSANTFPPELSALGWLFSTLLALYPLRLVAWAY 408


>UniRef50_A0BPN4 Cluster: Chromosome undetermined scaffold_12, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_12,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2459

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = +3

Query: 243 SSSAAYYGISRMDHCFWEKTFLA*SVARIILGLLDDVYFIGNISSGILR 389
           S S+    ++++DHC ++KT    +   ++ G++  VYF   I+  ++R
Sbjct: 359 SHSSELLTLTKVDHCIYDKTGTLTNTNTVLCGVICGVYFYNLINGDVIR 407


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,829,127
Number of Sequences: 1657284
Number of extensions: 15481755
Number of successful extensions: 39191
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39176
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)