Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29m02
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   0.95 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   2.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   3.8  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    24   5.0  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   8.8  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 166 HDPGLKQEENYPLLKVDAGGGDSCVGPQAPLTTVSPG 276
           + P   +  +YP   V AGG D  V     + ++ PG
Sbjct: 589 NQPSASEVADYPTASVPAGGADVVVPGAVGVRSIGPG 625


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 283  IASGRKHSWLNRWPELFSACWMTFILLGISLLVFYA 390
            +A G K  + N W      CW+ FI++ +SL+ F A
Sbjct: 1359 LALGFKVYFTNAW------CWLDFIIVMVSLINFVA 1388


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +1

Query: 166 HDPGLKQEENYPLLKVDAGGGDSCVGPQAPLTTVSPG 276
           + P   +  +YP   V  GG D  V     + ++ PG
Sbjct: 589 NQPSASEVADYPTASVPTGGADVVVPGAVGVRSIGPG 625


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 412 HQGLIFVNCNDTRPYSQVFYHQIVSAETY 498
           HQ     N +D  P S++F HQ +    Y
Sbjct: 670 HQSSSSSNHHDDEPMSEIFIHQAIHTIEY 698


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 602 VYCCESSIRKNQFKRRSGYCVTMFDRYP*YELNGKYVSAETI 477
           +Y C+ S   N+  R  G  +    RYP   LN    + E +
Sbjct: 60  IYRCDRSRLNNERSRGGGVLLACSSRYPSVALNMNQPTLEAL 101


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 602 VYCCESSIRKNQFKRRSGYCVTMFD 528
           +Y CE+   K Q  + + YC+T  D
Sbjct: 16  LYFCEAQTDKKQCAKNNEYCLTHRD 40


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +1

Query: 388 AIGI--SVYRHQGLIFVNCNDTRPYSQ 462
           A+G+  SV     L  V C +TRPY+Q
Sbjct: 174 ALGVIRSVNERNLLEHVYCTETRPYNQ 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,165
Number of Sequences: 2352
Number of extensions: 15703
Number of successful extensions: 71
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)