Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29l24
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 140 1e-33
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 133 1e-31
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 112 2e-25
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 108 3e-24
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 103 2e-22
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 95 6e-20
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 78 6e-15
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 76 2e-14
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 74 9e-14
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 71 8e-13
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 71 1e-12
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 66 2e-11
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 58 6e-09
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 58 6e-09
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 52 4e-07
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 51 7e-07
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 49 3e-06
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 48 9e-06
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 42 6e-04
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 41 8e-04
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 36 0.029
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 34 0.12
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 33 0.21
02_01_0749 - 5568149-5568226,5568396-5568466,5568602-5568647,556... 31 0.83
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.1
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 31 1.1
07_01_0699 - 5276790-5278826 28 7.7
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 140 bits (338), Expect = 1e-33
Identities = 61/103 (59%), Positives = 78/103 (75%)
Frame = +2
Query: 362 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 541
+LQIG+K +PE C++++ KGD + +HY G+L DG+ FDSS RG+P F LG+GQVIKGW
Sbjct: 39 ELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGW 98
Query: 542 DQGLLGMCEGEQRKLVIPPELAYGSAGAPPKILKSATLTFHVE 670
DQGLLGMC GE+RKL IP ++ YG G+PPKI ATL F E
Sbjct: 99 DQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTE 141
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 133 bits (321), Expect = 1e-31
Identities = 58/95 (61%), Positives = 73/95 (76%)
Frame = +2
Query: 386 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMC 565
+PE CSI++ KGD + +HY G L DGT+FDSS RG+P+ F+LG+GQVIKGWDQG+LGMC
Sbjct: 138 KPESCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMC 197
Query: 566 EGEQRKLVIPPELAYGSAGAPPKILKSATLTFHVE 670
GE+RKL IP +L YG+ G+PP I ATL F E
Sbjct: 198 VGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTE 232
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 112 bits (270), Expect = 2e-25
Identities = 51/88 (57%), Positives = 62/88 (70%)
Frame = +2
Query: 407 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 586
+ GD + +HYTGTL DGT+FDSS RG P F LG G+VIKGWD+G+ M +GEQ
Sbjct: 64 RPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVF 123
Query: 587 VIPPELAYGSAGAPPKILKSATLTFHVE 670
+PPELAYG AG+PP I +ATL F VE
Sbjct: 124 TVPPELAYGEAGSPPAIPPNATLRFDVE 151
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 419 GDLLHMHYTGTLDDGTEFDSSIPRGN-PLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIP 595
G ++ + + G L+DGT F G+ P F+ QVI+G D+ ++ M +GE + +P
Sbjct: 301 GAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLDRTVVTMKKGEVALVRLP 360
Query: 596 PELAYGS 616
P+ A+GS
Sbjct: 361 PQHAFGS 367
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +2
Query: 422 DLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPE 601
D + + Y L+DGT + + + + F + G + + M +GE+ L + P+
Sbjct: 185 DEVLVKYEARLEDGTV----VSKSDGVEFAVKDGYFCPALSKAVKTMKKGEKVLLTVKPQ 240
Query: 602 LAYGSAGAP 628
+G G P
Sbjct: 241 YGFGEQGKP 249
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 108 bits (260), Expect = 3e-24
Identities = 51/84 (60%), Positives = 59/84 (70%)
Frame = +2
Query: 419 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPP 598
GD + +HYTGTL DG +FDSS RG P FKLG GQVIKGWD G+ M +GE IPP
Sbjct: 64 GDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPP 123
Query: 599 ELAYGSAGAPPKILKSATLTFHVE 670
+LAYG +G+PP I SATL F VE
Sbjct: 124 DLAYGESGSPPTIPASATLQFDVE 147
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 407 KSRKGDLLHMHYTGTLDDGTEFDSS-IPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRK 583
+ +G ++ + TG L DGT F P FK +VI G D+ +L M GE
Sbjct: 298 RPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGIDRAVLNMKNGEVAL 357
Query: 584 LVIPPELAYGS 616
+ IPPE A+GS
Sbjct: 358 VTIPPEYAFGS 368
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 103 bits (246), Expect = 2e-22
Identities = 50/84 (59%), Positives = 57/84 (67%)
Frame = +2
Query: 419 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPP 598
GD + +HYTGTL DGT+FDSS R P F LG GQVIKGWD G+ M +GE IPP
Sbjct: 102 GDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPP 161
Query: 599 ELAYGSAGAPPKILKSATLTFHVE 670
ELAYG G+PP I +ATL F VE
Sbjct: 162 ELAYGEDGSPPVIPPNATLQFDVE 185
Score = 51.2 bits (117), Expect = 7e-07
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 383 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGN-PLTFKLGSGQVIKGWDQGLLG 559
+RP DC+ L+ + G L+DGT F + G+ P FK QV++G D+ +L
Sbjct: 346 ERPSDCT-------LVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLDKAVLS 398
Query: 560 MCEGEQRKLVIPPELAYGS 616
M +GE + IPPE A+GS
Sbjct: 399 MKKGEVALVTIPPEYAFGS 417
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = +2
Query: 410 SRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLG------MCEG 571
+ +G L+ HYTG L+DGT FDSS RG PLTF++G G+VIKGWDQG++G M G
Sbjct: 111 AEQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWDQGIVGGEGIPPMLAG 170
Query: 572 EQRKLVIPPELAYGSAGA 625
+R L +PPELAYG+ GA
Sbjct: 171 GKRSLRLPPELAYGARGA 188
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 78.2 bits (184), Expect = 6e-15
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Frame = +2
Query: 401 SIKSRKGDLLHMHYTGTL-DDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQ 577
SIK+ L +HY GTL ++G FD++ + +F++G G VIK WD + M GE
Sbjct: 115 SIKASASTLSTVHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIAVKTMKVGEV 174
Query: 578 RKLVIPPELAYGSAGAPPKI---LKSATLTFHVE 670
K+ PE AYG+AG+PP+I ++SATLTF VE
Sbjct: 175 AKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVE 208
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +2
Query: 407 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 586
K+ G + + Y G L +GT FDS++ R F+LG G+VIKGWD G+ GM G++R+L
Sbjct: 505 KASPGKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIKGWDIGINGMRVGDKRRL 563
Query: 587 VIPPELAYGSAGAPPKILKSATLTFHVE 670
IPP + YG+ P I +++TL F VE
Sbjct: 564 TIPPSMGYGNKRMGP-IPQNSTLVFDVE 590
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +2
Query: 419 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPP 598
G + + Y GTL DG +S++ P FKLG+G+VI+GWD G+ GM G++RKL +PP
Sbjct: 310 GSKVSIKYVGTLQDGKIVESNVGE-KPYKFKLGAGKVIRGWDVGICGMRVGDKRKLTVPP 368
Query: 599 ELAYGSAGAPPKILKSATLTFHVE 670
+ YGS A ++ K++++ + +E
Sbjct: 369 AMCYGSK-AIGEVPKNSSIIYEIE 391
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
Frame = +2
Query: 416 KGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLG------MCEGEQ 577
+G L+++HYT DG FDS+ RG PLT +LG+G++++G +QG+ G M G +
Sbjct: 129 RGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRGLEQGISGGGGVPPMLVGGK 188
Query: 578 RKLVIPPELAYG 613
RKL+IP LAYG
Sbjct: 189 RKLMIPATLAYG 200
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 365 LQIGIKKRPEDCSIKSRKGDLLHMHYTGTL-DDGTEFDSSIPRGNPLTFKLGSGQVIKGW 541
L+ ++K +D + L+ +HY GTL ++G FD++ + +F++G G VIK W
Sbjct: 14 LKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAW 73
Query: 542 DQGLLGMCEGEQRKLVIPPELAYGSAGAPPKI 637
D L M GE K+ PE AYGSAG+PP+I
Sbjct: 74 DIALRTMKVGEVAKITCKPEYAYGSAGSPPEI 105
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Frame = +2
Query: 437 HYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAY-- 610
+Y + +G FDSS+ +G P F++GSGQVIKG D+G+L M G R+L IP LA+
Sbjct: 170 NYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPK 229
Query: 611 GSAGAP--PKILKSATLTFHV 667
G AP P++ S+ + F V
Sbjct: 230 GLTSAPGRPRVAPSSPVMFDV 250
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 58.0 bits (134), Expect = 6e-09
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 419 GDLLHMHYTGTLDDGTEFDSSIPRGNPLT--FKLGSGQVIKGWDQGLLGMCEGEQRKLVI 592
G +++ Y L +G D P G T FKLG+G+VI GWD G+ GM G R+L I
Sbjct: 271 GKKVYVKYVCMLSNGDTVD---PTGESSTCKFKLGAGEVISGWDLGIDGMRVGGIRRLGI 327
Query: 593 PPELAYGSAGAPPKILKSATLTFHVE 670
PP L YG G I +A L F +E
Sbjct: 328 PPHLGYGDVGR-GNIPPNAWLNFDIE 352
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +2
Query: 407 KSRKGDLLHMHYTGTLDDGT---EFDSSIPRGN-PLTFKLGSGQVIKGWDQGLLGMCEGE 574
K KG + +H TG D +F S+ G P +F +G G VIKGWD+G++ M GE
Sbjct: 15 KPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWDEGVMTMQVGE 74
Query: 575 QRKLVIPPELAYGSAGAPP-KILKSATLTFHVE 670
++ P+ AYG++G P I ++ L F +E
Sbjct: 75 VARIQCTPDYAYGASGFPAWGIRPNSVLVFEIE 107
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = +2
Query: 434 MHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAYG 613
+H+TG DGT F S+ G PLTF LG V++G+ + M GE+ IPPELA
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELAGT 127
Query: 614 SAGAPPKI 637
+ P I
Sbjct: 128 KSRCPVDI 135
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 446 GTLDDGTEFDSSIPRGN-PLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPP 598
G L DG FD G+ P F + QV +G ++ +L M EGE IPP
Sbjct: 310 GKLQDGAVFDQRGHEGDEPFKFMVDEEQVSEGLEEAVLTMREGEVSLFTIPP 361
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 434 MHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAYG 613
++Y L+DG S+ + F L G + + + M EGE+ L++ PE +G
Sbjct: 188 VNYNACLEDGM----SVSMSEGIEFNLAEGFFCPAFARAVETMTEGEEAVLIVKPEYGFG 243
Query: 614 SAGAP 628
G P
Sbjct: 244 ERGRP 248
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +2
Query: 404 IKSRKGDLLHMHYTGTLDDGTEFDS----SIPRGNPLTFKLGS---GQVIKGWDQGLLGM 562
+K+ KG + +HY T S + G P F +G+ G V+KG D G+ GM
Sbjct: 135 LKAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDIGNSERGNVLKGLDLGVEGM 194
Query: 563 CEGEQRKLVIPPELAYGSAGAPPKILKSATL 655
G QR +++PPELAYG G +I +AT+
Sbjct: 195 KVGGQRLIIVPPELAYGKKGV-QEIPPNATI 224
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +2
Query: 404 IKSRKGDLLH----MHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEG 571
+KSR H +H+TG L DGT+F SS P F LG V+ G++ + M G
Sbjct: 1 MKSRSNKTWHKINGVHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPG 60
Query: 572 EQRKLVIPPELAYGSAGAPPKILK----SATLTFHVE 670
E+ IP L AG+P I + TL F +E
Sbjct: 61 EKAIFTIPSALTMTKAGSPASIPSNIPPNQTLRFEIE 97
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 377 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLL 556
I K E +S D + + Y L DGT S+ + + F L G + +
Sbjct: 117 IVKNAEPDRKQSHSSDFVFVKYDACLMDGT----SVSKSEGVEFSLTDGFFCPAFAHAVH 172
Query: 557 GMCEGEQRKLVIPPELAYGSAGAP 628
M EGE+ L++ P+ A+G G P
Sbjct: 173 TMKEGEEAVLIVKPKYAFGEQGRP 196
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +2
Query: 446 GTLDDGTEFDS-SIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAYGSAG 622
G L DGT FD P F + GQVI G D+ ++ M EGE + IPP+ A+ + G
Sbjct: 7 GKLQDGTVFDRRGYGDDEPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAVG 66
Query: 623 APPK----ILKSATLTFHVE 670
+ + ++AT+ + +E
Sbjct: 67 SDQHQFAFVPRNATVVYKIE 86
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 506 FKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAY 610
FK+GSGQVI +++ + M G R++++PP+L Y
Sbjct: 175 FKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGY 209
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Frame = +2
Query: 389 PEDCSIKSRKGDLLHMHYTGTLDDGTE---FDSSIPR-GNPLTFKLGSGQVIKGWDQGLL 556
P DC + LL +HY G L D + +D+ + G PL F G G V +G++ +
Sbjct: 321 PMDCPLHD---SLLRVHYKGMLLDEPKSIFYDTRVDNHGEPLEFCSGEGLVPEGFEMCVR 377
Query: 557 GMCEGEQRKLVIPPELAYGS-AGAPPKILKSATLTFHVE 670
M GE+ + PP+ AY P + + A + + +E
Sbjct: 378 LMLPGEKSIVTCPPDFAYDKFPRLPANVPEGAHVQWEIE 416
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 446 GTLDDGTEFDSSIPRGN-PLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPE 601
G L DG FD +G+ P F + QV G ++ +L M EGE IPP+
Sbjct: 206 GKLHDGAVFDQRGHQGDEPFEFVVDEEQVSDGLEEAVLTMWEGEVSLFTIPPQ 258
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 422 DLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPE 601
D + ++Y L+DG S+ + F L G + + + M EGE+ L++ E
Sbjct: 80 DEVLVNYNACLEDGM----SVSMSEGVEFNLAEGFFCPAFARAVETMTEGEEVVLIVKLE 135
Query: 602 LAYGSAGAP 628
+G G P
Sbjct: 136 YGFGERGRP 144
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 554 LGMCEGEQRKLVIPPELAYGSAGAPPKILKSATLTFHVE 670
LGM G +R+L IPP YG A PKI ++ L + VE
Sbjct: 483 LGMRVGGKRRLTIPPAQGYGDV-ATPKIPANSWLVYEVE 520
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +2
Query: 377 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLL 556
I KRP S D + ++Y L+DG +S+ + L L S +K +
Sbjct: 61 IIKRPLPDKSPSNHADTVIVNYNACLEDG----NSVSKSERLELNLASRTALK---YAVK 113
Query: 557 GMCEGEQRKLVIPPELAYGSAG 622
M EGE+ ++ P A+G+ G
Sbjct: 114 TMREGEEAIFIVKPRYAFGAQG 135
>02_01_0749 -
5568149-5568226,5568396-5568466,5568602-5568647,
5568800-5568843,5569267-5569301,5569414-5569520
Length = 126
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 452 LDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVIPPELAYGSAGAPP 631
LD G + ++++ +P + ++I+G ++GM G +R+ +IPP++ Y P
Sbjct: 40 LDSGVKLEAALC--DPARLTSLAARMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQP 97
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 530 IKGWDQGLLGMCEGEQRKLVIPPEL 604
I+G+++G+ M G +R+++IPPEL
Sbjct: 102 IQGFEEGIRDMKPGGKRRIIIPPEL 126
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 557 GMCEGEQRKLVIPPELAYGSAG 622
GM G +R++++PPEL YG G
Sbjct: 162 GMKVGGKRRVIVPPELGYGKKG 183
>07_01_0699 - 5276790-5278826
Length = 678
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 536 GWDQGLLGMCEGEQRKLVIPPELAYGSAGAPP 631
G DQG + +V+PPE A GS GA P
Sbjct: 297 GADQGCSSVFAALPDLIVLPPEEACGSGGAAP 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,381,221
Number of Sequences: 37544
Number of extensions: 249313
Number of successful extensions: 490
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -