Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29l20
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089567-1|AAL90305.1|  869|Drosophila melanogaster RE04259p pro...    29   4.0  
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB...    29   4.0  
AE014296-3342|AAF51582.2|  869|Drosophila melanogaster CG16993-P...    29   4.0  
U37134-1|AAC47004.1|  869|Drosophila melanogaster inturned prote...    28   5.3  

>AY089567-1|AAL90305.1|  869|Drosophila melanogaster RE04259p
           protein.
          Length = 869

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +3

Query: 105 GRLLKILKTSSENLLNYVTQGKIEYLVLRAIAVATKCHYRTLSSSSRSPEPGQGGSGSKT 284
           G L      SSEN  NY+++ +    ++ A+   +K + R LS SSR+     G S    
Sbjct: 742 GSLFAPFTDSSENS-NYLSEIRQACHIIHAVLQKSKHYRRHLSESSRAQTNSNGHSSHTV 800

Query: 285 KLV 293
            LV
Sbjct: 801 SLV 803


>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
           isoform B protein.
          Length = 1535

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +3

Query: 180 LVLRAIAVATKCHYRTLSSSSRSPEPGQGGSGSKTKLVTVTECN 311
           +VL  +AV   CH     S      PG GG  + +    V  CN
Sbjct: 229 IVLDKLAVCRHCHKNCQQSGPGGARPGGGGGVNNSSSTPVLLCN 272


>AE014296-3342|AAF51582.2|  869|Drosophila melanogaster CG16993-PA
           protein.
          Length = 869

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +3

Query: 105 GRLLKILKTSSENLLNYVTQGKIEYLVLRAIAVATKCHYRTLSSSSRSPEPGQGGSGSKT 284
           G L      SSEN  NY+++ +    ++ A+   +K + R LS SSR+     G S    
Sbjct: 742 GSLFAPFTDSSENS-NYLSEIRQACHIIHAVLQKSKHYRRHLSESSRAQTNSNGHSSHTV 800

Query: 285 KLV 293
            LV
Sbjct: 801 SLV 803


>U37134-1|AAC47004.1|  869|Drosophila melanogaster inturned protein
           protein.
          Length = 869

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +3

Query: 105 GRLLKILKTSSENLLNYVTQGKIEYLVLRAIAVATKCHYRTLSSSSRSPEPGQGGSGSKT 284
           G L      SSEN  NY+++ +    ++ A+   +K + R LS SSR+     G S    
Sbjct: 742 GSLFAPFTDSSENS-NYLSEIRQACHIIHAVLQKSKHYRRHLSESSRAQTNSNGHSSHTV 800

Query: 285 KLV 293
            L+
Sbjct: 801 SLI 803


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,529,902
Number of Sequences: 53049
Number of extensions: 341893
Number of successful extensions: 770
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)