Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29l11
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 40 0.002
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 40 0.002
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 40 0.002
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 40 0.002
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 40 0.002
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 33 0.24
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 6.7
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical protein
C02G6.1 protein.
Length = 980
Score = 45.2 bits (102), Expect = 4e-05
Identities = 51/222 (22%), Positives = 86/222 (38%), Gaps = 7/222 (3%)
Frame = +2
Query: 2 FEAVREVRARSYHN-VLLKPNRLAKDLRMQVLLEPYISPRDKAFVIHNITXXXXXXXXXX 178
FE + E R+ N +P L + ++++ S V ++T
Sbjct: 614 FEVLFESLKRTLTNHAFSQPYLLTQHYNQLLIVDKVWSKEQLLAVCDSVTLENVQGFARE 673
Query: 179 XXSKLYMQVLVQGNLAWYDAINISQNVFSNMQWESLSESEIPQLQVHELPLGERKLR--- 349
+M++ V GN +AI +S+ + ++ S + + P + P E +L
Sbjct: 674 MLQAFHMELFVHGNSTEKEAIQLSKELMDILK--SAAPNSRPLYRNEHNPRREFQLNNGD 731
Query: 350 ---VMSLNEASTNSIITNYYQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFS 520
L + + YQ V D A FD LRT E LGY V++
Sbjct: 732 EYIYRHLQKTHDAGCVEVTYQIGVQNKYDNAVVGLIDQLIKEPVFDTLRTNEALGYIVWT 791
Query: 521 MMRYTFGVLGFSVSVNTQVDKFSVSYVDGRVEAFLRKFYRDM 646
R+ G + ++ V Q K SV YV R+E FL +++
Sbjct: 792 GCRFNCGAVALNIFV--QGPK-SVDYVLERIEVFLESVRKEI 830
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical protein
Y70C5C.1 protein.
Length = 985
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +2
Query: 398 YQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFSMMRYTFGVLGFSVSVNTQV 577
YQ V D A FD LRTKE LGY V++ + G + + V Q
Sbjct: 762 YQIGVQNTYDNAVIGLIKNLITEPAFDTLRTKESLGYIVWTRTHFNCGTVALQILV--QG 819
Query: 578 DKFSVSYVDGRVEAFLRKFYRDM 646
K SV +V R+EAFL +++
Sbjct: 820 PK-SVDHVLERIEAFLESVRKEI 841
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +2
Query: 398 YQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFSMMRYTFGVLGFSVSVNTQV 577
YQ V D A FD LRTKE LGY V++ + G + + V Q
Sbjct: 762 YQIGVQNTYDNAVIGLIKNLITEPAFDTLRTKESLGYIVWTRTHFNCGTVALQILV--QG 819
Query: 578 DKFSVSYVDGRVEAFLRKFYRDM 646
K SV +V R+EAFL +++
Sbjct: 820 PK-SVDHVLERIEAFLESVRKEI 841
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 39.5 bits (88), Expect = 0.002
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 6/224 (2%)
Frame = +2
Query: 2 FEAVREVRARSYHNVLLKPNRLAKDLRMQVLLEPYISPRDKAFVIHNITXXXXXXXXXXX 181
FE+++ RA + H +P L + ++++ S V ++T
Sbjct: 704 FESLK--RALTNH-AFSQPYLLTQHYNQLLIVDKVWSKEQLLAVCDSVTLEDVQGFAKEM 760
Query: 182 XSKLYMQVLVQGNLAWYDAINISQNVFSNMQWESLSESEIPQLQVHELPLGERKLR---- 349
+M++ V GN +AI +S+ + ++ S + + P + P E +L
Sbjct: 761 LQAFHMELFVHGNSTEKEAIQLSKELMDVLK--SAAPNSRPLYRNEHNPRRELQLNNGDE 818
Query: 350 --VMSLNEASTNSIITNYYQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFSM 523
L + + YQ V D A F+ LRT E LGY V++
Sbjct: 819 YVYRHLQKTHDVGCVEVTYQIGVQNTYDNAVVGLIDQLIREPAFNTLRTNEALGYIVWTG 878
Query: 524 MRYTFGVLGFSVSVNTQVDKFSVSYVDGRVEAFLRKFYRDMKRL 655
R G + +V V Q K SV +V R+E FL +++ +
Sbjct: 879 SRLNCGTVALNVIV--QGPK-SVDHVLERIEVFLESVRKEIAEM 919
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 39.5 bits (88), Expect = 0.002
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 6/224 (2%)
Frame = +2
Query: 2 FEAVREVRARSYHNVLLKPNRLAKDLRMQVLLEPYISPRDKAFVIHNITXXXXXXXXXXX 181
FE+++ RA + H +P L + ++++ S V ++T
Sbjct: 645 FESLK--RALTNH-AFSQPYLLTQHYNQLLIVDKVWSKEQLLAVCDSVTLEDVQGFAKEM 701
Query: 182 XSKLYMQVLVQGNLAWYDAINISQNVFSNMQWESLSESEIPQLQVHELPLGERKLR---- 349
+M++ V GN +AI +S+ + ++ S + + P + P E +L
Sbjct: 702 LQAFHMELFVHGNSTEKEAIQLSKELMDVLK--SAAPNSRPLYRNEHNPRRELQLNNGDE 759
Query: 350 --VMSLNEASTNSIITNYYQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFSM 523
L + + YQ V D A F+ LRT E LGY V++
Sbjct: 760 YVYRHLQKTHDVGCVEVTYQIGVQNTYDNAVVGLIDQLIREPAFNTLRTNEALGYIVWTG 819
Query: 524 MRYTFGVLGFSVSVNTQVDKFSVSYVDGRVEAFLRKFYRDMKRL 655
R G + +V V Q K SV +V R+E FL +++ +
Sbjct: 820 SRLNCGTVALNVIV--QGPK-SVDHVLERIEVFLESVRKEIAEM 860
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 39.5 bits (88), Expect = 0.002
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 6/224 (2%)
Frame = +2
Query: 2 FEAVREVRARSYHNVLLKPNRLAKDLRMQVLLEPYISPRDKAFVIHNITXXXXXXXXXXX 181
FE+++ RA + H +P L + ++++ S V ++T
Sbjct: 704 FESLK--RALTNH-AFSQPYLLTQHYNQLLIVDKVWSKEQLLAVCDSVTLEDVQGFAKEM 760
Query: 182 XSKLYMQVLVQGNLAWYDAINISQNVFSNMQWESLSESEIPQLQVHELPLGERKLR---- 349
+M++ V GN +AI +S+ + ++ S + + P + P E +L
Sbjct: 761 LQAFHMELFVHGNSTEKEAIQLSKELMDVLK--SAAPNSRPLYRNEHNPRRELQLNNGDE 818
Query: 350 --VMSLNEASTNSIITNYYQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFSM 523
L + + YQ V D A F+ LRT E LGY V++
Sbjct: 819 YVYRHLQKTHDVGCVEVTYQIGVQNTYDNAVVGLIDQLIREPAFNTLRTNEALGYIVWTG 878
Query: 524 MRYTFGVLGFSVSVNTQVDKFSVSYVDGRVEAFLRKFYRDMKRL 655
R G + +V V Q K SV +V R+E FL +++ +
Sbjct: 879 SRLNCGTVALNVIV--QGPK-SVDHVLERIEVFLESVRKEIAEM 919
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 39.5 bits (88), Expect = 0.002
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 6/224 (2%)
Frame = +2
Query: 2 FEAVREVRARSYHNVLLKPNRLAKDLRMQVLLEPYISPRDKAFVIHNITXXXXXXXXXXX 181
FE+++ RA + H +P L + ++++ S V ++T
Sbjct: 688 FESLK--RALTNH-AFSQPYLLTQHYNQLLIVDKVWSKEQLLAVCDSVTLEDVQGFAKEM 744
Query: 182 XSKLYMQVLVQGNLAWYDAINISQNVFSNMQWESLSESEIPQLQVHELPLGERKLR---- 349
+M++ V GN +AI +S+ + ++ S + + P + P E +L
Sbjct: 745 LQAFHMELFVHGNSTEKEAIQLSKELMDVLK--SAAPNSRPLYRNEHNPRRELQLNNGDE 802
Query: 350 --VMSLNEASTNSIITNYYQAEVTTPSDLAXXXXXXXXXXXXXFDMLRTKEQLGYSVFSM 523
L + + YQ V D A F+ LRT E LGY V++
Sbjct: 803 YVYRHLQKTHDVGCVEVTYQIGVQNTYDNAVVGLIDQLIREPAFNTLRTNEALGYIVWTG 862
Query: 524 MRYTFGVLGFSVSVNTQVDKFSVSYVDGRVEAFLRKFYRDMKRL 655
R G + +V V Q K SV +V R+E FL +++ +
Sbjct: 863 SRLNCGTVALNVIV--QGPK-SVDHVLERIEVFLESVRKEIAEM 903
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 37 PQRAA*AEPTRQRPPDASVVGAVHIASRQSLCYPQHNSGRSERL 168
PQR + A P +Q+ P + + AVH A L YP GR R+
Sbjct: 103 PQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRV 146
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 238 RIIPSQVSLNQNLHIQFTEQSIMKVSQIVQSYVVDNKGFVSRR-YVRLQQ 92
RI S+V + E+ +K++ ++ ++ +GF+SRR Y R QQ
Sbjct: 761 RIGQSKVFFRTGVLAHLEEERDLKLTALIMNFQAQCRGFLSRRLYTRRQQ 810
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,961,129
Number of Sequences: 27780
Number of extensions: 236371
Number of successful extensions: 671
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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