Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29l05
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119126-1|AAM50986.1|  663|Drosophila melanogaster RE29544p pro...    30   2.7  
AE014134-1585|AAF52729.1|  663|Drosophila melanogaster CG18088-P...    30   2.7  

>AY119126-1|AAM50986.1|  663|Drosophila melanogaster RE29544p
           protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 369 ELLMLIYTNIIKRNDLFVCIE*APKLLNRFEKFFHCLKATLFPSNIA--YDVF*RKK 205
           +L+   Y  IIKR+ L +  E A KLLN  +K ++C    +    IA  YD    KK
Sbjct: 96  DLISTTYNEIIKRHILHIDDEIAQKLLNFTDKDYNCFYREIKYGKIADTYDNLKAKK 152


>AE014134-1585|AAF52729.1|  663|Drosophila melanogaster CG18088-PA
           protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 369 ELLMLIYTNIIKRNDLFVCIE*APKLLNRFEKFFHCLKATLFPSNIA--YDVF*RKK 205
           +L+   Y  IIKR+ L +  E A KLLN  +K ++C    +    IA  YD    KK
Sbjct: 96  DLISTTYNEIIKRHILHIDDEVAQKLLNFTDKDYNCFYREIKYGKIADTYDNLKAKK 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,938,546
Number of Sequences: 53049
Number of extensions: 521507
Number of successful extensions: 1256
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)