Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29k16
         (179 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   2.4  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    19   5.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          19   5.5  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    19   5.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    19   5.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   9.6  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 148 FLPMLSFNNDRC 113
           FLP+ SF   RC
Sbjct: 8   FLPVKSFRESRC 19


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 142 PPPNPRFGP 150


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 390 PPPNPRFGP 398


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 375 PPPNPRFGP 383


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 175 PXPSPRSGP 149
           P P+PR GP
Sbjct: 391 PPPNPRFGP 399


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 178  PPXPSPRSG 152
            PP P P SG
Sbjct: 1357 PPPPPPSSG 1365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,950
Number of Sequences: 438
Number of extensions: 382
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)