Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29k13
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 33 0.031
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 31 0.12
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 31 0.22
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 30 0.38
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 29 0.50
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.0
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 27 2.7
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 27 3.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 4.7
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 26 4.7
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 26 6.1
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 25 8.1
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 33.5 bits (73), Expect = 0.031
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 241 KKPVMVIIHKSWCTACKKLKPKFAS-SIDLQNLSKHFVMINLVDEEEPASSAFAPDGNYI 417
K P +V+ + WC CKKL P + + +L +L + D+ S + G
Sbjct: 48 KGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPT 107
Query: 418 PRIIFLSPEG-SVDHDIYNEDGS 483
++++ S +G S+ YN D S
Sbjct: 108 IKLVYPSSKGSSLSSTDYNGDRS 130
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 31.5 bits (68), Expect = 0.12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 244 KPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMIN 360
K +V + WC CK LKP F + QN F+ +N
Sbjct: 36 KVTVVDFYADWCGPCKYLKP-FLEKLSEQNQKASFIAVN 73
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 30.7 bits (66), Expect = 0.22
Identities = 25/102 (24%), Positives = 41/102 (40%)
Frame = +1
Query: 241 KKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASSAFAPDGNYIP 420
KK ++ + +WC CK L P + + + V+I +D + + A P
Sbjct: 39 KKGALIEFYATWCGHCKSLAPVY-EELGALFEDHNDVLIGKIDADTHSDVADKYHITGFP 97
Query: 421 RIIFLSPEGSVDHDIYNEDGSSQHKYFYSKPEQIVKSMRKIL 546
+I+ P+GS N F S+ I K RKI+
Sbjct: 98 TLIWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKK--RKIV 137
Score = 29.9 bits (64), Expect = 0.38
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 223 QIATNHKKPVMVIIHKSWCTACKKLKPKF 309
++ + KK V+V + WC CK+L P +
Sbjct: 152 KVVMDDKKDVLVEFYADWCGYCKRLAPTY 180
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 29.9 bits (64), Expect = 0.38
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 405 IWSKSAASGFFLIDQINHDEMLAQIL*VNRTSKFRLQ--FLAGRAPRFVNDHH 253
+W SAA F I H + + +N ++ + FLAG +P+F+ D+H
Sbjct: 119 LWRVSAALSFLNDKNIVHGNLQMSSVYLNSADEWIIGDFFLAGDSPQFIKDNH 171
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 29.5 bits (63), Expect = 0.50
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 211 ESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSID 324
+ G+ K +MV + WC CK L P++ S+ D
Sbjct: 29 KEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAAD 66
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +1
Query: 226 IATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASSAFAPD 405
I + K V+V + WC CK L P + + + + V+ + E S + +
Sbjct: 368 IVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDISVSISG- 426
Query: 406 GNYIPRIIFLSPEGSVDHDIYNED 477
P I+F V+ Y D
Sbjct: 427 ---FPTIMFFKANDKVNPVRYEGD 447
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 205 SLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSK-HFVMINLVDEEEP 381
SL+ A++ K+ ++V + S C+ L ++ + + HF+ + L+D+EEP
Sbjct: 160 SLDEARIEASSQKRWILVNLQTSTSFECQVLNRDLWKDESVKEVIRAHFLFLQLLDDEEP 219
Query: 382 AS--SAFAPDGNYIPRIIFLSP 441
F P + P I L P
Sbjct: 220 GMEFKRFYPVRS-TPHIAILDP 240
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 265 HKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAFAPDGNYIPRIIFLSP 441
+ WC CK + P F S + + S FV + VDE+ +S +P +F
Sbjct: 27 YADWCGPCKAISPLF-SQLASKYASPKFVFAKVNVDEQRQIASGLGVKA--MPTFVFFEN 83
Query: 442 EGSVD 456
+D
Sbjct: 84 GKQID 88
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 244 KPVMVIIHKSWCTACKKLKPKF 309
K V+V +WC CK + PKF
Sbjct: 19 KLVVVDFFATWCGPCKAIAPKF 40
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -2
Query: 215 DSREPAQM*LLPKPLSFPASHLTLWNMNEHNVLARAPATMIK*FVHDEKLK 63
D + P Q LPK H+ WN ++LA AT V D KLK
Sbjct: 146 DIKHPQQPFALPKQNRSSEVHVVSWNNKVSHILASGNATEYT-TVWDVKLK 195
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 26.2 bits (55), Expect = 4.7
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 361 LVDEEEPASSAFAPDGNYIP--RIIFLSPEGSVDHDIYNEDGSSQHKYFYSKPEQIVKSM 534
L+ +E A SA + D + + LS G V D+ ++G + PE+ V+S
Sbjct: 261 LIPPKEDADSAASSDAAELETDKSSNLSSNGEVKSDLKQDNGKEE-------PEKEVEST 313
Query: 535 RKILEKYKHEQFDA*KIPN 591
IL+ +K + +PN
Sbjct: 314 PSILQNFKVSLVNVENVPN 332
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 361 LVDEEEPASSAFAPDGNYIPRIIFLSPEG-SVDHDIYNEDGSSQHKYFYSKPEQIVKSMR 537
L+D+EE + P I+F S EG S + D+++ G + KP K ++
Sbjct: 188 LMDDEERKMTICGTPNYIAPEILFNSKEGHSFEVDLWSA-GVVMYALLIGKPPFQDKEVK 246
Query: 538 KILEKYKHEQF 570
I K K +
Sbjct: 247 TIYRKIKANSY 257
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 633 YF*KICIFSIHRMWIRYLLSIELFVFVFFEYFSHR 529
+F + +F + R W+ L V++F + FSHR
Sbjct: 188 FFSALLVFLVSRSWVAGQLGQAPEVWLFNQIFSHR 222
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,009,910
Number of Sequences: 5004
Number of extensions: 65795
Number of successful extensions: 195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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