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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29k12
         (318 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch...    28   0.39 
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c...    27   0.52 
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|...    27   0.69 
SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|c...    25   2.1  
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl...    25   2.1  
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22...    25   3.7  
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo...    25   3.7  
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po...    25   3.7  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    25   3.7  
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    25   3.7  
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch...    25   3.7  
SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces pomb...    25   3.7  
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch...    24   4.8  
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual        24   4.8  
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa...    24   4.8  
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M...    24   4.8  
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy...    24   4.8  
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar...    24   6.4  
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    23   8.5  
SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein S10|Schizosa...    23   8.5  
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ...    23   8.5  
SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein S10|S...    23   8.5  

>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 677

 Score = 27.9 bits (59), Expect = 0.39
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 240 IPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNN 115
           IP++PN + T  A+    P+NTPT      T+  P  T S+N
Sbjct: 364 IPASPNVRATQIATQVPNPQNTPT------TTAVPGITNSSN 399


>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 598

 Score = 27.5 bits (58), Expect = 0.52
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 243 NIPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPT 139
           N P+APNS  T PA+  G+  N PT      + PT
Sbjct: 310 NKPTAPNSAFTKPATSTGD--NKPTFSFGNTSKPT 342


>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
            subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1752

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 240  IPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            +PS+P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1572 MPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSP 1615



 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSP 1622



 Score = 25.4 bits (53), Expect = 2.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1594 PTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSP 1636



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1664



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1671



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1692



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1706



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1720



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1727



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1734



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1741



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1706 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1748



 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            P++P+   TSP+     P  +PT      TSP+   T  + +P
Sbjct: 1601 PTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1643



 Score = 23.4 bits (48), Expect = 8.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
            PS+P    TSPA     P  +PT      TSP+   T  + +P
Sbjct: 1560 PSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSP 1601



 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 237  PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPT 139
            P++P+   TSP+     P  +PT      TSP+
Sbjct: 1720 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752


>SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 341

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 76  VIWL*LVI*YLWGIIRFSITGSGAG 150
           ++W  L+I +L+G+ RFS+  + AG
Sbjct: 238 LLWPFLIILHLYGVERFSLPSTTAG 262


>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 557

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 261 ETVYMHNIPSAPNSKDTSPASPRGEPRNTP 172
           ET   HN  S P+S  ++P S  G   +TP
Sbjct: 421 ETKQSHNQLSIPSSTPSTPLSDNGPTYSTP 450


>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
           Snf22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1680

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -1

Query: 255 VYMHNIP-SAPNSKDTSPASPRGEPRNTPTIQ--PQLCTSPT 139
           VY +N+P SA + + +S  SP  +P    + Q  P++  SP+
Sbjct: 368 VYRNNLPPSATSFQPSSSRSPSVDPNTVKSAQHIPRMSPSPS 409


>SPAC26H5.07c |||seven transmembrane receptor-like
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 505

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 19  YPVLFHLLWHLPVTTTHISVIWL*LVI*YLW 111
           Y   + LLW L    T I V+ L L I YLW
Sbjct: 394 YLKYWKLLWFLNYGYTDILVLILMLTILYLW 424


>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1014

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -1

Query: 276  RLCECETV--YMHNIPSAPNSKDTSPASPRGEPRNTPTIQ 163
            RL    TV   MHN+PS+ N  D + ++ R     + T Q
Sbjct: 937  RLLHITTVNEMMHNVPSSMNHSDYNTSATRPRRLGSRTFQ 976


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 252 YMHNIPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSP 142
           Y  + PSA  S  +SP      P+ + T+  ++ +SP
Sbjct: 318 YSSSRPSASASLASSPTRSAFRPKTSETVSSEVVSSP 354


>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 860

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 261 ETVYMHNIPSAPNSKDTSPASPRGEP 184
           +T+  +++PSAP+++  S A+P   P
Sbjct: 363 DTLASNHVPSAPSNESVSSAAPSKIP 388


>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
            Mok12|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2352

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 182  RGSPLGLAGDVSFEFGADGILCI 250
            R  P GL   V+ EFG  G+LCI
Sbjct: 1551 RDEPFGL---VAVEFGRKGVLCI 1570


>SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 240

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 302 DNNLLLLRFVYVNVKQSICTIFHQRQTQR 216
           D  L +  F  +N  Q IC +F  +QT +
Sbjct: 147 DRPLAIRLFEQINGLQQICVVFKHKQTSQ 175


>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 273 LCECETVYMHNIPSAPNSKDTSPASPRGEPRNTPTIQPQL 154
           + EC T+  + IP+  + +D    +P G  +    + P L
Sbjct: 66  ITECTTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPIL 105


>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1279

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = -1

Query: 267  ECETVYMHNIPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTPKILY 97
            E +T  M NIP+  + ++T   +  G P N    +  +       YT+    P  +Y
Sbjct: 1065 ERKTSTMLNIPNVLDPEETVTITIVGSPENCEKAKEMIQEKVASQYTQMITVPDTVY 1121


>SPCC18B5.03 |wee1||dual specificity protein kinase
           Wee1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 877

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -1

Query: 189 EPRNTPTIQPQLCTSPTPCYTESNNTPKILYYK 91
           EPRN PTI   L T    C+ E       + Y+
Sbjct: 824 EPRNRPTIDQILATDEV-CWVEMRRKAGAIIYE 855


>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 535

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -1

Query: 243 NIPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTPKIL 100
           N P AP++++  P+    E + +P          +P    SN+T   L
Sbjct: 333 NEPPAPSAENKQPSVSSPEKKESPATHLLKVIGSSPYVVHSNHTNNTL 380


>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 243 NIPSAPNSKDTSPASPRGEPRNTPTIQ 163
           ++P   N  + S  + +G+P NTP ++
Sbjct: 104 SLPQTVNLSEISNNNDKGQPTNTPPVR 130


>SPBC23G7.08c |rga7||GTPase activating protein
           Rga7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 234 SAPNSKDTSPASPRGEPRNT 175
           SAP+S  T+PASP   P NT
Sbjct: 3   SAPSSS-TTPASPPTSPPNT 21


>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 682

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -1

Query: 246 HNIPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNT 112
           ++IP   NS   S  +      + P + P + T P P  T S+++
Sbjct: 129 NSIPLMANSCLLSADNSSSSTTSNPNVAPPISTLPDPVATISSSS 173



 Score = 23.4 bits (48), Expect = 8.5
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -1

Query: 249 MHNIPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 109
           M++  S P      P +  G P N+ T       SP+P    SN+ P
Sbjct: 347 MYSTASVPQQISNGPTAVNGLPMNSYTPHSNHLHSPSP---NSNSGP 390


>SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein
           S10|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 144

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 81  LVIACNII-SLGYYSIQYNREWGWY 152
           ++ AC  + S GY   +YN  WGW+
Sbjct: 42  VIKACQSLDSRGYLKTRYN--WGWF 64


>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 727

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 252 YMHNIPSAPNSKDTSPASP 196
           Y+H  P   N  D SP+SP
Sbjct: 87  YLHPTPPYTNFDDESPSSP 105


>SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein
           S10|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 147

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 81  LVIACNII-SLGYYSIQYNREWGWY 152
           ++ AC  + S GY   +YN  WGW+
Sbjct: 42  VIKACQSLDSRGYLKTRYN--WGWF 64


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,560,894
Number of Sequences: 5004
Number of extensions: 35348
Number of successful extensions: 140
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 85983492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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