Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29k01
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical
           protein F44E5.2 protein.
          Length = 820

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 453 RRKEGAMIKI*NYHLLTERNEFVRIKKTSSPNI 355
           RRK GA     N H  TE N F R+ + SS N+
Sbjct: 579 RRKAGAEKDDNNMHNKTEANYFSRMSRESSSNV 611


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 143 SCLGDVPHWEFLRKKLK*FSNEKKHYSIDEFCEAVRIKI 27
           SC+    H   LR  LK    E+ HYS+ E   +V I I
Sbjct: 292 SCIMAEVHMALLRNCLKSDDEEQTHYSVTETNNSVNIMI 330


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 143 SCLGDVPHWEFLRKKLK*FSNEKKHYSIDEFCEAVRIKI 27
           SC+    H   LR  LK    E+ HYS+ E   +V I I
Sbjct: 292 SCIMAEVHMALLRNCLKSDDEEQTHYSVTETNNSVNIMI 330


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 143 SCLGDVPHWEFLRKKLK*FSNEKKHYSIDEFCEAVRIKI 27
           SC+    H   LR  LK    E+ HYS+ E   +V I I
Sbjct: 292 SCIMAEVHMALLRNCLKSDDEEQTHYSVTETNNSVNIMI 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,719,921
Number of Sequences: 27780
Number of extensions: 189826
Number of successful extensions: 293
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)