Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29j24
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0292 - 2285238-2286023,2286094-2286210 48 9e-06
04_03_0648 - 18393142-18393174,18393259-18393341,18393569-183936... 44 1e-04
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 43 3e-04
04_04_0105 - 22812730-22813066,22813406-22813565,22814613-22814820 41 8e-04
06_02_0052 - 10964659-10964919,10964938-10965006,10965069-109651... 41 0.001
12_01_0844 + 7915121-7915225,7915724-7915777,7915888-7915968,791... 40 0.002
11_06_0581 - 25189303-25189470,25190178-25190715,25190789-25190877 40 0.002
06_02_0051 - 10957857-10958127,10959791-10960035,10960160-109602... 40 0.002
11_06_0591 - 25300751-25300918,25301325-25301874,25301954-25302042 39 0.003
06_02_0059 - 11022306-11022578,11022812-11022881,11022966-110232... 38 0.010
12_02_1230 - 27204881-27205765 34 0.091
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835... 32 0.49
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 31 0.64
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 31 1.1
04_04_1139 + 31173271-31173462,31173928-31174087,31174318-311744... 30 2.0
11_06_0399 - 23129476-23129745,23131040-23131121,23131216-231317... 29 3.4
10_08_0835 - 20916364-20916462,20916503-20916549,20916750-209168... 29 3.4
10_06_0012 - 9586478-9588880 29 4.5
08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426 29 4.5
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 4.5
04_03_0541 - 16934460-16934573,16934663-16934738,16934815-169350... 28 7.9
02_04_0664 + 24826714-24826842,24826912-24826947,24827551-248276... 28 7.9
>05_01_0292 - 2285238-2286023,2286094-2286210
Length = 300
Score = 47.6 bits (108), Expect = 9e-06
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = +2
Query: 2 IDVVVNNAAVSLEN------SLEGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGG---T 154
ID++VNNAA E + + + R+ N+ + + A++ MR + G G +
Sbjct: 127 IDILVNNAAEQYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCS 186
Query: 155 IINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDLV 334
IIN SSI A K ++ Y TK A++ F+ + Q ++ G+RV V GP T L+
Sbjct: 187 IINTSSINAYKGN-KTLLDYTATKGAIVAFTRALALQ--LAEEGIRVNGVAPGPIWTPLI 243
Query: 335 P 337
P
Sbjct: 244 P 244
>04_03_0648 -
18393142-18393174,18393259-18393341,18393569-18393662,
18393746-18393880,18394190-18394222,18394302-18394396,
18394494-18394539,18394639-18394719,18395464-18395517,
18395809-18395951,18397645-18397804
Length = 318
Score = 43.6 bits (98), Expect = 1e-04
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Frame = +2
Query: 2 IDVVVNNAAVSLENSLEGIRR-----LVDINVTALVMSTLKAIEIMRVDKTGKGGTIINI 166
IDV+VNNA ++ + L +++ ++D+N+T + + T A +IM K GK IINI
Sbjct: 154 IDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKIMMKKKKGK---IINI 210
Query: 167 SSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDLVPLMI 346
+S+ L Y K+ V+ + + + EY S+ + V + G +D+
Sbjct: 211 ASVVGLVGNIGQA-NYSAAKAGVIGLTKTVAR-EYASR-NINVNAIAPGFIASDMT---A 264
Query: 347 NIDDSINPEIRSNIDAQKLQTAESAARGLLE 439
+ + + +I S I + E A GL+E
Sbjct: 265 ELGEDLEKKILSTIPLGRYGKPEEVA-GLVE 294
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +2
Query: 2 IDVVVNNAAVSLENSLEGIRR-----LVDINVTALVMSTLKAIEIMRVDKTGKGGTIINI 166
IDV+VNNA ++ + L +++ +VD+N+T + + T A ++M K G+ +INI
Sbjct: 148 IDVLVNNAGITRDTLLLRMKKSQWQDVVDLNLTGVFLCTQAATKVMMKKKKGR---VINI 204
Query: 167 SSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDL 331
+S+ L V Y K+AV+ + ++ F+ + V V G +D+
Sbjct: 205 ASVVGLTGNLGQV-NYAAAKAAVIGLTKTTARE--FASRNITVNAVAPGFISSDM 256
>04_04_0105 - 22812730-22813066,22813406-22813565,22814613-22814820
Length = 234
Score = 41.1 bits (92), Expect = 8e-04
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +2
Query: 2 IDVVVNNAAVSL-----ENSLEGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTIINI 166
+DV+VNNA V L E +E +++ D NV M + A+ +++ + GTI+N+
Sbjct: 37 VDVLVNNAGVHLVAPLAEVPMEEFQQVFDTNVYG-AMRLIHAVIPQMIER--EQGTIVNV 93
Query: 167 SSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDL 331
SI AL P VY +K+A+ S+ + + G+ V+ V G T ++L
Sbjct: 94 GSITALAP-GPWAGVYSASKAALHALSDTLRLE--LKSFGINVMIVAPGGTKSNL 145
>06_02_0052 -
10964659-10964919,10964938-10965006,10965069-10965138,
10965861-10966420
Length = 319
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Frame = +2
Query: 8 VVVNNAAVSL-------ENSLEGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTIINI 166
+VVNNA V+ E +E R+V +NV+A+ T + M G+GG ++NI
Sbjct: 108 IVVNNAGVAEPGAVYLHEADVEAWARMVRVNVSAVTEVTAAVLPGMVA--RGRGGAVVNI 165
Query: 167 SSIAALK-QFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRV 295
S A+ P +Y TK V QFS + EY SK G+ V
Sbjct: 166 GSAASESIPSLPLYTMYSSTKRYVAQFSRSL-HVEYASK-GIHV 207
>12_01_0844 +
7915121-7915225,7915724-7915777,7915888-7915968,
7916164-7916209,7916311-7916405,7916581-7916613,
7916941-7917286,7917372-7917511
Length = 299
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Frame = +2
Query: 2 IDVVVNNAAVSLENSLEGIRR-----LVDINVTALVMSTLKAIEIMRVDKTGKGGTIINI 166
+DV+VNNA ++ + L ++R +VD+N+T + + A +M + K G+ IINI
Sbjct: 88 LDVLVNNAGITRDALLMRMKRTQWQEVVDVNLTGVYLCAQAAAGVMMMKKKGR---IINI 144
Query: 167 SSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSK 280
+S++ + YC K+ V+ + + + EY S+
Sbjct: 145 TSVSGIIGNIGQA-NYCAAKAGVIGLTKAMAR-EYGSR 180
>11_06_0581 - 25189303-25189470,25190178-25190715,25190789-25190877
Length = 264
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 140 GKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPT 319
G GG ++NISS+A P++ VY TK + Q + + + ++ G+RV V G
Sbjct: 146 GGGGCVVNISSVAGTVGI-PALAVYSMTKGGMNQLTRSLAAE--WAGDGIRVNCVAPGGV 202
Query: 320 DTDLVPLMINIDDSINPE-IRSNID 391
TD+ D++I+PE I+S +D
Sbjct: 203 KTDICQ-----DETIDPELIKSEMD 222
>06_02_0051 -
10957857-10958127,10959791-10960035,10960160-10960229,
10960319-10960986
Length = 417
Score = 39.5 bits (88), Expect = 0.002
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Frame = +2
Query: 2 IDVVVNNA------AVSL-ENSLEGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTII 160
+ VVVNNA AV L E +E R+ +NV+A+ T + M V++ G+GG ++
Sbjct: 142 VGVVVNNASEGRPGAVYLHEADVEEWVRMARVNVSAVTEVTAAVLPGM-VER-GRGGAVV 199
Query: 161 NISSIA--ALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRV 295
N+ S A A+ F P +Y TK V QFS + EY +K G+ V
Sbjct: 200 NLGSAASEAIPSF-PLYTMYASTKRYVAQFSRSL-HVEYANK-GIHV 243
>11_06_0591 - 25300751-25300918,25301325-25301874,25301954-25302042
Length = 268
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 140 GKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPT 319
G GG ++NISS+A P++ VY TK + Q + + + ++ G+RV V G
Sbjct: 150 GGGGCVVNISSVAG-SVGMPALAVYSMTKGGMNQLTRSLAAE--WAGDGIRVNCVAPGGV 206
Query: 320 DTDLVPLMINIDDSINPE-IRSNID 391
TD+ D++I+PE I+S +D
Sbjct: 207 KTDICQ-----DETIDPELIKSEMD 226
>06_02_0059 -
11022306-11022578,11022812-11022881,11022966-11023254,
11023770-11024109
Length = 323
Score = 37.5 bits (83), Expect = 0.010
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Frame = +2
Query: 2 IDVVVNNAAVSL-------ENSLEGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTI- 157
+ VVVNNA V+ E +E + R++ +N+ AL T + M + G+G +
Sbjct: 130 VGVVVNNAGVAKPGAMFLHEVEVEPLMRMIRVNMLALTKVTAAVLPGMVM--RGRGAVVN 187
Query: 158 INISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRV 295
I +S AL F P VY GTK+ V +FS G + + G+ V
Sbjct: 188 IGSASAEALPSF-PLYSVYAGTKAYVGEFSR--GLSVEYKRKGIDV 230
>12_02_1230 - 27204881-27205765
Length = 294
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 2 IDVVVNNAAVSLENSL-----EGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTIINI 166
+DV+VNNA + L E +RR +D+N + ++A+ + + G ++N+
Sbjct: 89 VDVLVNNAGIGCTGPLAELRGEAVRRAMDVNFLG-QLRMVRAVAPHMASR--RSGRVVNV 145
Query: 167 SSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDL 331
S+ P YC +K+AV ++ + + GV V+ V G + L
Sbjct: 146 GSVVGTAA-TPWAGPYCASKAAVHAATDALRVE--LRPFGVHVVKVVPGAVRSGL 197
>11_04_0145 +
14082864-14082946,14083060-14083267,14083383-14083599,
14084170-14084276,14085521-14085674,14086848-14087029
Length = 316
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 149 GTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTD 328
G+I+NISS+A++ F S+ +Y K A+ Q + + + ++ G+RV +V G T
Sbjct: 145 GSIVNISSVASVLAF-HSLPIYSAAKGAMNQVTRNLACE--WASDGIRVNSVAPGYIQTP 201
Query: 329 LVPLMINIDD 358
L+ + +D
Sbjct: 202 LLTAFVAGND 211
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 368 PEIRSNIDAQKLQTAESAARGLLEAYKNGASGSTWLVFDSKVTEITSNI---DRAYDIMS 538
P + SN+D + Q + A G+L A+K + TW +S +TE+ + D+ + ++
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITW-EKESLITELRKELQISDKEHRVLL 95
Query: 539 ENFTK 553
+ T+
Sbjct: 96 KGVTE 100
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 209 VYCGTKSAVL--QFSNCIGKQEYFSKTGVRVITVCYGPTDTDLVPLMINIDDSINPEIRS 382
VY GTK + Q ++ +G+ G+ TD+V +I +DD P
Sbjct: 190 VYEGTKQYLAGGQDTSNLGRGSLILSGGLAGAVFWLSVYPTDVVKSVIQVDDYKKPRYSG 249
Query: 383 NIDAQKLQTAESAARGLLEAY 445
++DA K A +GL + +
Sbjct: 250 SVDAFKKILAADGVKGLYKGF 270
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 323 TDLVPLMINIDDSINPEIRSNIDAQKLQTAESAARGLLEAY 445
TD+V +I +DD NP+ ++DA + A +GL + +
Sbjct: 528 TDVVKSVIQVDDYKNPKYSGSMDAFRKILAADGVKGLYKGF 568
>04_04_1139 +
31173271-31173462,31173928-31174087,31174318-31174487,
31174566-31174788,31175053-31175207
Length = 299
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Frame = +2
Query: 2 IDVVVNNAAVSLENSLE-----GIRRLVDINVTALVMSTLKAIEIMRVDKTGK----GGT 154
+D++VN AA + S E G R +VDI+ +A++ ++ GK GG
Sbjct: 92 LDILVNGAAGNFLASPEDLTPKGFRTVVDIDTVGTYTMCYEALKYLKKGGPGKGPSTGGV 151
Query: 155 IINISS 172
IINIS+
Sbjct: 152 IINISA 157
>11_06_0399 -
23129476-23129745,23131040-23131121,23131216-23131711,
23132135-23132699,23132825-23132893
Length = 493
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 38 ENSLEGIRRLVDINVTALVMSTLKAIEIMRVDK 136
E +RR VD +VTAL + T A E+ DK
Sbjct: 181 EKRASAVRRSVDADVTALALYTAPAAEVFLKDK 213
>10_08_0835 -
20916364-20916462,20916503-20916549,20916750-20916864,
20916933-20917011,20917365-20917518,20917660-20917739,
20918170-20918401,20918755-20918860
Length = 303
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +2
Query: 2 IDVVVNNAAVSLEN---SLEGIRRLVDINVTALVMSTLKAIEIMR--VDKTGKGGTIINI 166
+++++NNA + N S++G+ N + T +E M+ KTG G I+N+
Sbjct: 109 LNILINNAGIMTRNCTRSIDGLELQFATNHIGHFLLTNLLLENMKRTSSKTGVEGRIVNV 168
Query: 167 SSIA 178
SS A
Sbjct: 169 SSSA 172
>10_06_0012 - 9586478-9588880
Length = 800
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 110 AIEIMRVDKTGKGGTIINISSIAALKQFCPSVFV 211
A E+ V++ K GT+I ++ A++ C +FV
Sbjct: 428 ANEVQSVERKKKSGTVIGVTIAASMSALCLMIFV 461
>08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426
Length = 284
Score = 28.7 bits (61), Expect = 4.5
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Frame = +2
Query: 2 IDVVVNNAAV--SLENSLEGIRRLVDINV-TALVMSTLKAIEIMRVDKTGK-GGTIINIS 169
IDV++NNA + + + L+ + + T L S L A + R + K G++INIS
Sbjct: 105 IDVLINNAGLRGGVHSPLDWPEDEWETLIKTNLTGSWLVAKHVCRRMRDAKLKGSVINIS 164
Query: 170 SIAALKQ-FCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVITVCYGPTDTDL-VPLM 343
S++ L + P Y +KSA+ + + + G+RV ++ G +++ PL+
Sbjct: 165 SVSGLNRGHLPGSTGYAASKSAMHYATKLMALE--LGAYGIRVNSIAPGIFKSEITAPLL 222
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 32 SLENSLEGIRRLVDINVTALVMSTLKAIEIMRVDKTGKGGTIINISSIA 178
S E ++ +VD + ALV L+A ++ VDK+GK + ++S++
Sbjct: 385 SAEEHKRAMKDIVDGHFRALVAQLLQAEKVQLVDKSGKQSWLDIVTSLS 433
>04_03_0541 -
16934460-16934573,16934663-16934738,16934815-16935071,
16935161-16935259,16935338-16935536,16935620-16935833,
16935988-16936056,16936144-16936468,16936583-16936753,
16936833-16936997,16937073-16937709,16937776-16937837,
16938098-16938169,16938689-16938724,16938794-16938922
Length = 874
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 356 DSINPEIRSNIDAQKLQTAESAARGLLEAYKNGASGSTWLVFDSKVTEITSNID 517
D I P I +D +QTA A+ A+K + + + + VT++ I+
Sbjct: 441 DEILPTISDFVDISTMQTAIHASNLFKRAFKTNITAAVKIAIRAAVTKVIDTIE 494
>02_04_0664 +
24826714-24826842,24826912-24826947,24827551-24827622,
24827882-24827943,24828010-24828646,24828722-24828886,
24828966-24829136,24829251-24829575,24829663-24829731,
24829886-24830099,24830183-24830381,24830460-24830558,
24830648-24830904,24830981-24831056,24831146-24831259
Length = 874
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 356 DSINPEIRSNIDAQKLQTAESAARGLLEAYKNGASGSTWLVFDSKVTEITSNID 517
D I P I +D +QTA A+ A+K + + + + VT++ I+
Sbjct: 441 DEILPTISDFVDISTMQTAIHASNLFKRAFKTNITAAVKIAIRAAVTKVIDTIE 494
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,591
Number of Sequences: 37544
Number of extensions: 309992
Number of successful extensions: 740
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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