Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29j23
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 32 0.37
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL132860-25|CAB60510.1| 413|Caenorhabditis elegans Hypothetical... 29 3.4
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 4.5
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 4.5
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 28 5.9
AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta p... 28 5.9
AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha ... 28 5.9
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 674 SGPLLPVAPSSPEEQQHFSDVFAEVPRTMPFNSQTINLFP-PVEPETSARPDELPS*FCK 498
+ P P AP ++ V A V + P + + P PVEP A P +LPS
Sbjct: 194 AAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEPSDPAPPSKLPSPSKS 253
Query: 497 CADSAAGSAR 468
C D A GS R
Sbjct: 254 CTDLAGGSQR 263
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 175 GPMVCYKYE-DCGPPKK---KSADGNSGAEEGGSKKKDENENQLKRTKSRELRG 324
GP Y+ + D G KK +S DG+ G EEG S KK++ N LKR E G
Sbjct: 90 GPGKLYRAKKDDGQEKKGDPQSRDGDEGEEEG-SDKKEKKGNPLKREHGDEGEG 142
>AL132860-25|CAB60510.1| 413|Caenorhabditis elegans Hypothetical
protein Y56A3A.31 protein.
Length = 413
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 524 LVGLKSPAPLAGTGLLSAN*KASSSEP 604
L G +S APLAG+G+L++N A SS P
Sbjct: 6 LGGAESAAPLAGSGVLASN-SAGSSPP 31
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 202 DCGPPKKKSADGNSGAEEGGSKKKDENENQLKRTKSR 312
DCGPP +DG G+ G K D+ E L R R
Sbjct: 233 DCGPPGAPGSDGKPGSPGG---KGDDGERPLGRPGPR 266
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 202 DCGPPKKKSADGNSGAEEGGSKKKDENENQLKRTKSR 312
DCGPP +DG G+ G K D+ E L R R
Sbjct: 233 DCGPPGAPGSDGKPGSPGG---KGDDGERPLGRPGPR 266
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 598 GTSANTSEKCCCSSGEDGATGSNGPLSSLPVLLMK 702
G + + +++ CCSS + G+N + +PV L +
Sbjct: 34 GLALSRAKRQCCSSNSNSCCGNNNNVQCIPVCLQQ 68
>Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical
protein F11C1.6b protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -2
Query: 674 SGPLLPVAPSSPEEQ-QHF-SDVFAEVPRTMPFNSQTINLFPPVE 546
+ P+LP+ P+ E+ HF + AE+ +T+P ++Q +F V+
Sbjct: 217 TSPILPLCPAPTEKTVDHFYNSSIAEMCKTLPDDAQIARIFTSVK 261
>Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical
protein F11C1.6a protein.
Length = 572
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -2
Query: 674 SGPLLPVAPSSPEEQ-QHF-SDVFAEVPRTMPFNSQTINLFPPVE 546
+ P+LP+ P+ E+ HF + AE+ +T+P ++Q +F V+
Sbjct: 297 TSPILPLCPAPTEKTVDHFYNSSIAEMCKTLPDDAQIARIFTSVK 341
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 217 KKKSADGNSGAEEGGSKKKDENENQLKRTKSRELRG 324
KK+ +GN G + + ENE Q KR K R+ G
Sbjct: 779 KKRRENGNEGGDNDVCRICCENERQEKREKKRKSSG 814
>AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta
protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -2
Query: 674 SGPLLPVAPSSPEEQ-QHF-SDVFAEVPRTMPFNSQTINLFPPVE 546
+ P+LP+ P+ E+ HF + AE+ +T+P ++Q +F V+
Sbjct: 217 TSPILPLCPAPTEKTVDHFYNSSIAEMCKTLPDDAQIARIFTSVK 261
>AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha
protein.
Length = 568
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -2
Query: 674 SGPLLPVAPSSPEEQ-QHF-SDVFAEVPRTMPFNSQTINLFPPVE 546
+ P+LP+ P+ E+ HF + AE+ +T+P ++Q +F V+
Sbjct: 293 TSPILPLCPAPTEKTVDHFYNSSIAEMCKTLPDDAQIARIFTSVK 337
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 638 EEQQHFSDVFAEVPRTMPFNSQTINLFPPVEPETSARPDELPS 510
++Q+ + EV +P SQT++L P P R +PS
Sbjct: 284 KDQEQVDECVTEVRPILPVLSQTLSLDDPDHPHDGDRSSRVPS 326
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 638 EEQQHFSDVFAEVPRTMPFNSQTINLFPPVEPETSARPDELPS 510
++Q+ + EV +P SQT++L P P R +PS
Sbjct: 284 KDQEQVDECVTEVRPILPVLSQTLSLDDPDHPHDGDRSSRVPS 326
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 638 EEQQHFSDVFAEVPRTMPFNSQTINLFPPVEPETSARPDELPS 510
++Q+ + EV +P SQT++L P P R +PS
Sbjct: 258 KDQEQVDECVTEVRPILPVLSQTLSLDDPDHPHDGDRSSRVPS 300
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 638 EEQQHFSDVFAEVPRTMPFNSQTINLFPPVEPETSARPDELPS 510
++Q+ + EV +P SQT++L P P R +PS
Sbjct: 248 KDQEQVDECVTEVRPILPVLSQTLSLDDPDHPHDGDRSSRVPS 290
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 638 EEQQHFSDVFAEVPRTMPFNSQTINLFPPVEPETSARPDELPS 510
++Q+ + EV +P SQT++L P P R +PS
Sbjct: 275 KDQEQVDECVTEVRPILPVLSQTLSLDDPDHPHDGDRSSRVPS 317
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 638 EEQQHFSDVFAEVPRTMPFNSQTINLFPPVEPETSARPDELPS 510
++Q+ + EV +P SQT++L P P R +PS
Sbjct: 234 KDQEQVDECVTEVRPILPVLSQTLSLDDPDHPHDGDRSSRVPS 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,590,233
Number of Sequences: 27780
Number of extensions: 397511
Number of successful extensions: 1472
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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