Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j17
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC099728-1|AAH99728.1|  798|Homo sapiens protocadherin beta 14 p...    30   8.3  
BC098144-1|AAH98144.1|  797|Homo sapiens PCDHB14 protein protein.      30   8.3  
AF217744-1|AAK51612.1|  798|Homo sapiens protocadherin-beta14 pr...    30   8.3  
AF152493-1|AAD43754.1|  798|Homo sapiens protocadherin beta 14 p...    30   8.3  

>BC099728-1|AAH99728.1|  798|Homo sapiens protocadherin beta 14
           protein.
          Length = 798

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/43 (30%), Positives = 30/43 (69%)
 Frame = -3

Query: 587 TYDFKSSSKNKKQRFELFDPLNGESPICVTL*FKIIKHFTVNL 459
           +Y F  +S++ ++ FE+ +P++GE  +   L F++I+ +T+N+
Sbjct: 278 SYTFFHASEDIRKTFEI-NPISGEVNLRSPLDFEVIQSYTINI 319


>BC098144-1|AAH98144.1|  797|Homo sapiens PCDHB14 protein protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/43 (30%), Positives = 30/43 (69%)
 Frame = -3

Query: 587 TYDFKSSSKNKKQRFELFDPLNGESPICVTL*FKIIKHFTVNL 459
           +Y F  +S++ ++ FE+ +P++GE  +   L F++I+ +T+N+
Sbjct: 277 SYTFFHASEDIRKTFEI-NPISGEVNLRSPLDFEVIQSYTINI 318


>AF217744-1|AAK51612.1|  798|Homo sapiens protocadherin-beta14
           protein.
          Length = 798

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/43 (30%), Positives = 30/43 (69%)
 Frame = -3

Query: 587 TYDFKSSSKNKKQRFELFDPLNGESPICVTL*FKIIKHFTVNL 459
           +Y F  +S++ ++ FE+ +P++GE  +   L F++I+ +T+N+
Sbjct: 278 SYTFFHASEDIRKTFEI-NPISGEVNLRSPLDFEVIQSYTINI 319


>AF152493-1|AAD43754.1|  798|Homo sapiens protocadherin beta 14
           protein.
          Length = 798

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/43 (30%), Positives = 30/43 (69%)
 Frame = -3

Query: 587 TYDFKSSSKNKKQRFELFDPLNGESPICVTL*FKIIKHFTVNL 459
           +Y F  +S++ ++ FE+ +P++GE  +   L F++I+ +T+N+
Sbjct: 278 SYTFFHASEDIRKTFEI-NPISGEVNLRSPLDFEVIQSYTINI 319


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,699,625
Number of Sequences: 237096
Number of extensions: 1786771
Number of successful extensions: 3106
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3106
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)