Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j12
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.9  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 428 FCITKQPRWDCWK 466
           +C+ K PRWD  K
Sbjct: 179 YCVVKIPRWDLGK 191


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 382 VKLEPAPN-NTFGLYMVLYHEAAAVGLLETVLFHEDGATCISEIAIDLLQYALDQL 546
           V  +P  N N + +  V     A  GL E    H   A CI+ +A+D++  A D++
Sbjct: 449 VLTDPKKNPNVYKVETVGDKYMAVSGLPEPCRCH---ARCIARLALDMMDLAADEV 501


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 591 SYYVTLLTFCTLRLKVFCAFRK 656
           S+Y+ L     +  K+FCA R+
Sbjct: 210 SFYIPLFVMIQVYYKIFCAARR 231


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 382 VKLEPAPN-NTFGLYMVLYHEAAAVGLLETVLFHEDGATCISEIAIDLLQYALDQL 546
           V  +P  N N + +  V     A  GL E    H   A CI+ +A+D++  A D++
Sbjct: 449 VLTDPKKNPNVYKVETVGDKYMAVSGLPEPCRCH---ARCIARLALDMMDLAADEV 501


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   ELRNSEGRHYSILHFYI 51
           EL N EG HY  + +Y+
Sbjct: 285 ELHNIEGTHYVKIVYYL 301


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   ELRNSEGRHYSILHFYI 51
           EL N EG HY  + +Y+
Sbjct: 300 ELHNIEGTHYVKIVYYL 316


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,669
Number of Sequences: 438
Number of extensions: 4119
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)