Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j10
         (401 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990...    44   6e-05

>04_04_1163 - 31398565-31398654,31398729-31398812,31398893-31399037,
            31399118-31399239,31399338-31399376,31399491-31399601,
            31399682-31399804,31399946-31400032,31400136-31400207,
            31400349-31400621,31400704-31400895,31400988-31401171,
            31401339-31401480,31401578-31401821,31401959-31402603,
            31403024-31403293
          Length = 940

 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 22/93 (23%), Positives = 43/93 (46%)
 Frame = +2

Query: 56   RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
            +YKL   V+L ++A+  P   TGAD+                  L     + SE S D +
Sbjct: 843  KYKLHENVSLLSIAQQCPPNFTGADIYALCADAWYHAAKNLAKTLEADPSRTSEASADDV 902

Query: 236  VIGVSELWEGVVSFRPSVTDDELSHYEAMESQM 334
            ++ +++    +    PS++ +EL +YE +  ++
Sbjct: 903  IVEINDFMTVLGDITPSLSIEELQNYEQLRKKI 935


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,131,419
Number of Sequences: 37544
Number of extensions: 160349
Number of successful extensions: 265
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)