Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29j10
(401 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 38 0.013
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 38 0.017
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 38 0.017
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 38 0.017
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 38 0.017
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 38 0.017
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 38 0.017
AL512385-2|CAH71730.1| 1072|Homo sapiens protein ( Human DNA seq... 29 5.8
AL031230-1|CAI22601.1| 1072|Homo sapiens ific phospholipase D1, ... 29 5.8
AB002317-1|BAA20777.2| 1109|Homo sapiens KIAA0319 protein. 29 5.8
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 37.9 bits (84), Expect = 0.013
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EQGSSAL 944
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 37.5 bits (83), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 37.5 bits (83), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 37.5 bits (83), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 37.5 bits (83), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 37.5 bits (83), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 37.5 bits (83), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 56 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
++KL P V+L V + P + TGADL L G E ++
Sbjct: 801 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 856
Query: 236 VIGVSELWEGVVSFRPSVTDDELSHYEAME 325
++ + +L + +PSV++ EL Y+ ++
Sbjct: 857 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 886
>AL512385-2|CAH71730.1| 1072|Homo sapiens protein ( Human DNA
sequence from clone RP11-252E3 on chromosome 6 Contains
part of the gene KIAA0319 and a keratin 8 (KRT8)
pseudogene. ).
Length = 1072
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 NGTLKESELSPDSIVIGVSELWEGVVSFRPSVTDDE 301
NG E + S DS V+ +S L G SFR +VTD +
Sbjct: 474 NGPFIEEKTSVDSPVLRLSNLDPGNYSFRLTVTDSD 509
>AL031230-1|CAI22601.1| 1072|Homo sapiens ific phospholipase D1, the
SSADH protein.
Length = 1072
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 NGTLKESELSPDSIVIGVSELWEGVVSFRPSVTDDE 301
NG E + S DS V+ +S L G SFR +VTD +
Sbjct: 474 NGPFIEEKTSVDSPVLRLSNLDPGNYSFRLTVTDSD 509
>AB002317-1|BAA20777.2| 1109|Homo sapiens KIAA0319 protein.
Length = 1109
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 NGTLKESELSPDSIVIGVSELWEGVVSFRPSVTDDE 301
NG E + S DS V+ +S L G SFR +VTD +
Sbjct: 511 NGPFIEEKTSVDSPVLRLSNLDPGNYSFRLTVTDSD 546
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,546,881
Number of Sequences: 237096
Number of extensions: 856319
Number of successful extensions: 1296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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