Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j10
         (401 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058375-1|AAL13604.1|  897|Drosophila melanogaster GH14288p pro...    42   3e-04
AE013599-1191|AAF58736.3|  897|Drosophila melanogaster CG11919-P...    42   3e-04
AY071511-1|AAL49133.1|  339|Drosophila melanogaster RE56633p pro...    27   9.4  
AE014297-4044|AAF56652.1|  339|Drosophila melanogaster CG6283-PA...    27   9.4  

>AY058375-1|AAL13604.1|  897|Drosophila melanogaster GH14288p protein.
          Length = 897

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 21/91 (23%), Positives = 44/91 (48%)
 Frame = +2

Query: 56   RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
            R+ L   V++E +AE L  + +GADL                    +GT+ E EL P+++
Sbjct: 803  RFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENV 862

Query: 236  VIGVSELWEGVVSFRPSVTDDELSHYEAMES 328
            ++   +  +    F PS++  +L ++  +++
Sbjct: 863  IVQEEDFTKSFNKFVPSISAKDLEYFNNLKA 893


>AE013599-1191|AAF58736.3|  897|Drosophila melanogaster CG11919-PA,
            isoform A protein.
          Length = 897

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 21/91 (23%), Positives = 44/91 (48%)
 Frame = +2

Query: 56   RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 235
            R+ L   V++E +AE L  + +GADL                    +GT+ E EL P+++
Sbjct: 803  RFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENV 862

Query: 236  VIGVSELWEGVVSFRPSVTDDELSHYEAMES 328
            ++   +  +    F PS++  +L ++  +++
Sbjct: 863  IVQEEDFTKSFNKFVPSISAKDLEYFNNLKA 893


>AY071511-1|AAL49133.1|  339|Drosophila melanogaster RE56633p
           protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 288 SQTMNCRITKRWSHKCKINSFLVYWS 365
           S  MN RITK W  K   N  +V W+
Sbjct: 111 SDDMNTRITKAWLSKGDYNVIVVDWA 136


>AE014297-4044|AAF56652.1|  339|Drosophila melanogaster CG6283-PA
           protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 288 SQTMNCRITKRWSHKCKINSFLVYWS 365
           S  MN RITK W  K   N  +V W+
Sbjct: 111 SDDMNTRITKAWLSKGDYNVIVVDWA 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,235,791
Number of Sequences: 53049
Number of extensions: 266745
Number of successful extensions: 456
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)