Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j10
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    27   3.8  
U39849-3|AAN63461.1|   83|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U39849-2|AAN63462.2|  370|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical ...    27   5.0  
U42439-3|AAA83507.1|  310|Caenorhabditis elegans Hypothetical pr...    26   8.8  

>Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical
           protein T11G6.1b protein.
          Length = 521

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +2

Query: 209 ESELSPDSIVIGVSELWEGVVSFRPSVTDDE 301
           E    P +IVIG  EL +GVV  R  VT DE
Sbjct: 472 EERRIPLAIVIGEQELKDGVVKLRNVVTRDE 502


>Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical
           protein T11G6.1a protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +2

Query: 209 ESELSPDSIVIGVSELWEGVVSFRPSVTDDE 301
           E    P +IVIG  EL +GVV  R  VT DE
Sbjct: 471 EERRIPLAIVIGEQELKDGVVKLRNVVTRDE 501


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -3

Query: 366 KTSRLENCLFYXXXXXXXXXXXXXSVTEGRNDTTPSHSSLTPITMESGLSSLSFNVP 196
           KTS  +N LF              S+   R   +P+ S+  P+T+   LS++  NVP
Sbjct: 791 KTSYNQNLLFVRNIGSNRFLSLGSSIGTLRIPKSPTESATVPVTITVSLSAVDTNVP 847


>U39849-3|AAN63461.1|   83|Caenorhabditis elegans Hypothetical
           protein C06A8.8b protein.
          Length = 83

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 AVETTCSKSAPVHLSGSASATAS 85
           A++T+C KSAPV  S S+   +S
Sbjct: 53  AIDTSCEKSAPVSSSSSSKQQSS 75


>U39849-2|AAN63462.2|  370|Caenorhabditis elegans Hypothetical
           protein C06A8.8a protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 AVETTCSKSAPVHLSGSASATAS 85
           A++T+C KSAPV  S S+   +S
Sbjct: 245 AIDTSCEKSAPVSSSSSSKQQSS 267


>AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical
           protein C27A12.6 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 291 QTMNCRITKRWSHKCKINSFLVYW 362
           + +NCR  K+W  KC+ +S  + W
Sbjct: 249 EPLNCRHLKKWIKKCQDDSETMNW 272


>U42439-3|AAA83507.1|  310|Caenorhabditis elegans Hypothetical
           protein F19C7.3 protein.
          Length = 310

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = +3

Query: 294 TMNCRITKRWSHKCK---INSFLVYW 362
           +M+C++ K W H+     IN F+ +W
Sbjct: 200 SMDCKVIKLWRHQLHPQLINQFIYHW 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,876,882
Number of Sequences: 27780
Number of extensions: 137008
Number of successful extensions: 240
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)