Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29j09
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical ... 31 0.33
Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical pr... 30 0.76
AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.00
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 1.7
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.3
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.3
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 2.3
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 2.3
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 2.3
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 2.3
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical pr... 28 3.1
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 28 3.1
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 4.0
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 4.0
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 4.0
Z78064-10|CAB01510.3| 299|Caenorhabditis elegans Hypothetical p... 27 5.3
X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium ... 27 5.3
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 27 5.3
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 27 5.3
AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical... 27 5.3
AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical... 27 5.3
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 7.0
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 27 7.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 7.0
AF125446-2|AAD12805.1| 379|Caenorhabditis elegans Hypothetical ... 27 7.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 7.0
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 27 9.3
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 27 9.3
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC006723-1|AAF59429.3| 534|Caenorhabditis elegans Hypothetical ... 27 9.3
>AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical
protein R06B10.2 protein.
Length = 1014
Score = 31.5 bits (68), Expect = 0.33
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 97 KNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRN 276
K T D I GL + +S+ EE+ + E K V G + K D K L
Sbjct: 49 KLTEIVDGINGLQRKLDSSSEQLEEQLMMFASVYEKTKGVVPGSIIPK--DDVYKTQLDA 106
Query: 277 LKSQSSKSVNKAKGGVLLKSSDQNM-NLTDDDDPYVK 384
LK + SK + AKG V+ + ++M +T DDD +K
Sbjct: 107 LKIKWSKVDSFAKGIVIFLNEMESMEGVTSDDDANIK 143
>Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical
protein ZC302.3 protein.
Length = 236
Score = 30.7 bits (66), Expect = 0.57
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 130 LIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKS 300
L+K K++T E + + K I + E+ SKFK + +L+ LK SS S
Sbjct: 175 LVKKIKDATMKAEAYEFFMDDKRVRKVIGELNEIDSKFKENIGAWLLQQLKIDSSLS 231
>Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical
protein F53F4.4 protein.
Length = 605
Score = 30.3 bits (65), Expect = 0.76
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 139 NEKNSTF--SKEEESRVITENNETKKIVDFGELTSK-FKGDSSKHVLRNLKSQSSKSVNK 309
++KN+T SKEEE TE+ + KK+ GE+TS + ++ L N S+ S + +
Sbjct: 180 DDKNTTLGVSKEEEVIATTESTKEKKLKS-GEVTSHVLESTTTVEFLENKISEKSNEIVE 238
Query: 310 AKG 318
G
Sbjct: 239 GSG 241
>AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical
protein Y106G6D.2 protein.
Length = 248
Score = 29.9 bits (64), Expect = 1.00
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 INKKMDEFFKKLKNTVT-YDNIVGLIKNEKNSTFSKEEESRVITENNETKKI 213
IN+ M K L + V ++ + G I+NE N + EEE+++ +N K++
Sbjct: 178 INEYMSNMQKNLSSAVNEFNTLRGQIRNELNPEDNDEEEAKIRKQNMMKKQM 229
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 64 NKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNET 204
NK +E + + DN++ ++ E++ FSK VI ++NE+
Sbjct: 105 NKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEVICQDNES 151
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 64 NKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNET 204
NK +E + + DN++ ++ E++ FSK VI ++NE+
Sbjct: 234 NKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEVICQDNES 280
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 109 TYDNIVGLIKNEKNSTFSKEEESRVITEN 195
TY I G + K + FSKEE ++VI+ N
Sbjct: 327 TYQGITGNTRPSKATVFSKEEANKVISWN 355
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +1
Query: 28 TNSDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETK 207
T D +N+++D F KK+K T D++ K + ++ + E+ + + + K
Sbjct: 845 TGKDIDTKTKNLNREVDRFMKKMKKITTLDDLAKDGKIDIDTIVEEAEKKKAEQDKKKEK 904
Query: 208 K 210
K
Sbjct: 905 K 905
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSK 240
E +KLK T+ + I L+ S S EN ET K+V+ ++ K
Sbjct: 577 EIVEKLKETMVGEKIKFLVSRVSQSAIMSTSASSENKENEETLKVVEEEKIPQK 630
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSK 240
E +KLK T+ + I L+ S S EN ET K+V+ ++ K
Sbjct: 541 EIVEKLKETMVGEKIKFLVSRVSQSAIMSTSASSENKENEETLKVVEEEKIPQK 594
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSK 240
E +KLK T+ + I L+ S S EN ET K+V+ ++ K
Sbjct: 577 EIVEKLKETMVGEKIKFLVSRVSQSAIMSTSASSENKENEETLKVVEEEKIPQK 630
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSK 240
E +KLK T+ + I L+ S S EN ET K+V+ ++ K
Sbjct: 577 EIVEKLKETMVGEKIKFLVSRVSQSAIMSTSASSENKENEETLKVVEEEKIPQK 630
>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
protein C18H2.5 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 4 LTFKHSSTTNSDCSNGQICINKKMDEF--FKKLKNTVTYDNIVGLIKNEKNSTFSKEEE 174
L FKHS + + G IC+ ++ + ++ N+ YDN V N+K + F++ ++
Sbjct: 555 LKFKHSMKIATKLAKGMICLRDLIESYKLRSEILNSANYDNGV----NDKIANFNENKQ 609
>U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical
protein M02F4.1 protein.
Length = 399
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 67 KKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFS 162
K D FKK++NT+ +G I N +N+ S
Sbjct: 355 KNDDHCFKKIQNTILVTEAIGKIFNRENTAHS 386
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 109 TYDNIVGLIKNEKNSTFSKEEESRVITEN 195
TY I G + K + FSKEE +VI+ N
Sbjct: 306 TYQGITGNTRPSKATVFSKEEAKKVISWN 334
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 27.9 bits (59), Expect = 4.0
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 145 KNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSV---NKAK 315
KN+ KEEES I E++E I F F GD K + +SV K +
Sbjct: 31 KNAEKEKEEESEKIAESDEKPTISSF-----FFSGDDDKAGSSDSDDSEGESVGPKKKRR 85
Query: 316 GGVLLKSSDQNMNLTDDDDPYVKND 390
G + D+ + D+ Y + +
Sbjct: 86 SGESVTELDKEFTSSIFDNDYAREE 110
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = +1
Query: 25 TTNSDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNE 201
T+ NGQ+ + K+MDE + ++ ++ + +K + +++ ++ ++ R+ NE
Sbjct: 982 TSKETAENGQLQVQKQMDE--EDRRSEFSFKEEIASLKQKLDASLTEADDLRMQVSRNE 1038
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = +1
Query: 25 TTNSDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNE 201
T+ NGQ+ + K+MDE + ++ ++ + +K + +++ ++ ++ R+ NE
Sbjct: 982 TSKETAENGQLQVQKQMDE--EDRRSEFSFKEEIASLKQKLDASLTEADDLRMQVSRNE 1038
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/48 (27%), Positives = 32/48 (66%)
Frame = +1
Query: 232 TSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDDP 375
+S+ KG+ +KH+L++ K + ++++ AK +++K + + +T D+ P
Sbjct: 101 SSRLKGNLTKHILKHHKKEQNEAI--AKDDIIVKKAPK--IVTKDNGP 144
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/48 (27%), Positives = 32/48 (66%)
Frame = +1
Query: 232 TSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDDP 375
+S+ KG+ +KH+L++ K + ++++ AK +++K + + +T D+ P
Sbjct: 84 SSRLKGNLTKHILKHHKKEQNEAI--AKDDIIVKKAPK--IVTKDNGP 127
>Z78064-10|CAB01510.3| 299|Caenorhabditis elegans Hypothetical
protein F57B1.1 protein.
Length = 299
Score = 27.5 bits (58), Expect = 5.3
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -3
Query: 218 STIFFVSLFSVITLDSSSFEKVLFFSFLINPTILS*VTVFFNFLKNSSIFLFIQICPLLQ 39
STI ++ + S F+K++FF FL TI + NFL N LF L+
Sbjct: 6 STILTGVFLALSVILWSHFKKMIFFWFLTQLTISVFIMSSLNFLINVPATLF----ALIT 61
Query: 38 SEFV 27
EFV
Sbjct: 62 KEFV 65
>X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 880
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFK 246
+ FK+L++ +V L K+ ++++SR T+K++ G++ K K
Sbjct: 317 DIFKQLRSEHPDAPVVELEKHAMEKVVGEQKKSRAFYRIQTTRKMIGSGDIQKKLK 372
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 22 STTNSDCSNGQICINKKMD 78
STT+ C NGQ CI+K+++
Sbjct: 1182 STTHLSCLNGQKCISKQLE 1200
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 31 NSDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSK--EEESRVITENN 198
+ DC N +C ++ + KN Y NIV K NS FSK E VI +N
Sbjct: 136 SKDCVNNVMCKCQRRSKLQNMAKNLEEYKNIVEHPK--VNSLFSKLSEHTGEVINADN 191
>AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical
protein Y113G7A.4b protein.
Length = 873
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFK 246
+ FK+L++ +V L K+ ++++SR T+K++ G++ K K
Sbjct: 317 DIFKQLRSEHPDAPVVELEKHAMEKVVGEQKKSRAFYRIQTTRKMIGSGDIQKKLK 372
>AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical
protein Y113G7A.4a protein.
Length = 880
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +1
Query: 79 EFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFK 246
+ FK+L++ +V L K+ ++++SR T+K++ G++ K K
Sbjct: 317 DIFKQLRSEHPDAPVVELEKHAMEKVVGEQKKSRAFYRIQTTRKMIGSGDIQKKLK 372
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 7.0
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +1
Query: 40 CSNGQICI--NKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKI 213
C++G + + N M + K K ++ V K E K ++S +EN+ +
Sbjct: 1221 CNDGGLKLEGNHSMSDRLKNRKRSLDLIKDVDCEKKEAEHDVKKTKKSTSGSENDTDAEE 1280
Query: 214 VDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDD 372
DF +T + V+ N S++ K + AK ++ SS++ +D DD
Sbjct: 1281 TDFHSITER-----QPKVVEN--SENRKRASSAKRRLVTSSSEE----SDQDD 1322
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 94 LKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLR 273
LK + Y+NIV +KN + S E S + +K + G + +S + L
Sbjct: 2033 LKASHAYENIVEALKNATEAVDSAAEASEAV-----SKMLGSEGSESGDANEESLRSQLE 2087
Query: 274 NLKSQSSKS 300
LK++SS S
Sbjct: 2088 KLKNESSLS 2096
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 7.0
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +1
Query: 40 CSNGQICI--NKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKI 213
C++G + + N M + K K ++ V K E K ++S +EN+ +
Sbjct: 1221 CNDGGLKLEGNHSMSDRLKNRKRSLDLIKDVDCEKKEAEHDVKKTKKSTSGSENDTDAEE 1280
Query: 214 VDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDD 372
DF +T + V+ N S++ K + AK ++ SS++ +D DD
Sbjct: 1281 TDFHSITER-----QPKVVEN--SENRKRASSAKRRLVTSSSEE----SDQDD 1322
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 94 LKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLR 273
LK + Y+NIV +KN + S E S + +K + G + +S + L
Sbjct: 2033 LKASHAYENIVEALKNATEAVDSAAEASEAV-----SKMLGSEGSESGDANEESLRSQLE 2087
Query: 274 NLKSQSSKS 300
LK++SS S
Sbjct: 2088 KLKNESSLS 2096
>AF125446-2|AAD12805.1| 379|Caenorhabditis elegans Hypothetical
protein R05C11.2 protein.
Length = 379
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 185 ITLDSSSFEKVLFFS--FLINPTILS*VTVFFNFLKNSSIF 69
I LDS S + V++ FL++P L F N N+SIF
Sbjct: 272 IILDSLSLKNVIYLRDMFLVSPDFLQFKVTFVNSDVNNSIF 312
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 94 LKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLR 273
LK + Y+NIV +KN + S E S + +K + G + +S + L
Sbjct: 2033 LKASHAYENIVEALKNATEAVDSAAEASEAV-----SKMLGSEGSESGDANEESLRSQLE 2087
Query: 274 NLKSQSSKS 300
LK++SS S
Sbjct: 2088 KLKNESSLS 2096
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical protein
F23D12.2 protein.
Length = 1322
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 55 ICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFS--KEEESRVITENNETK 207
+ K+M EF +K KN I + + NST S EE + V TE N K
Sbjct: 1021 VAAEKRMKEFLEKKKNAKQRFPIPKAVNSSGNSTRSIVIEETNTVKTELNARK 1073
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 145 KNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSK 297
K+ KE+ + + N+++ VDF +T K +++ + K Q +K
Sbjct: 5 KSVNLKKEQSTETVLSNSQSPSFVDFKRITRSKKYSAAQKNAPDEKKQCTK 55
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 VLFFSFLINP-TILS*VTVFFNFLKNSSIFLFIQICPLLQSEFVVLECLNVN 3
++FF + P TI+S + FN ++N + L P++ +E ++ N N
Sbjct: 353 IVFFQTPVTPATIISINGIMFNHIRNMNFMLQFPNVPVITAELPIVLRENAN 404
>AC006723-1|AAF59429.3| 534|Caenorhabditis elegans Hypothetical
protein Y19D10B.2 protein.
Length = 534
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -3
Query: 203 VSLFSVITLDSSSFEKVLFFSFLINPTILS*VTVFFNFLKN 81
V + S ++DS F +++F S +IN T L+ FNFL+N
Sbjct: 476 VEVGSSSSIDSLKFMEIIFGSLIINGTNLT----NFNFLEN 512
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.129 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,076,369
Number of Sequences: 27780
Number of extensions: 162900
Number of successful extensions: 462
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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