Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j04
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L27943-1|AAA57254.1|  146|Homo sapiens cytidine deaminase protein.    108   1e-23
AL391357-8|CAH73474.1|  146|Homo sapiens cytidine deaminase prot...   108   1e-23
AJ000474-1|CAA04113.1|  146|Homo sapiens cytidine deaminase prot...   108   1e-23
AF061658-1|AAD15828.1|  146|Homo sapiens cytidine deaminase prot...   108   1e-23
S52873-1|AAB24946.1|  145|Homo sapiens cytidine deaminase protein.    107   4e-23
BC054036-1|AAH54036.1|  146|Homo sapiens cytidine deaminase prot...   107   4e-23
AF095644-1|AAC69599.1|   51|Homo sapiens cytidine deaminase prot...    46   2e-04
AY634312-1|AAT47715.2|   82|Homo sapiens small cytidine deaminas...    44   5e-04
S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein.                 30   8.2  
S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrat...    30   8.2  
BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substr...    30   8.2  

>L27943-1|AAA57254.1|  146|Homo sapiens cytidine deaminase protein.
          Length = 146

 Score =  108 bits (260), Expect = 1e-23
 Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 521
           E VQ LL+ + + +K AYCPYS+F VGAA+LT+E  R++ GCNIEN+     +CAER+A+
Sbjct: 13  ECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 71

Query: 522 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEF 632
            KAV +GY  F+ +AI +  Q +F +PCG CRQ + EF
Sbjct: 72  QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREF 109


>AL391357-8|CAH73474.1|  146|Homo sapiens cytidine deaminase
           protein.
          Length = 146

 Score =  108 bits (260), Expect = 1e-23
 Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 521
           E VQ LL+ + + +K AYCPYS+F VGAA+LT+E  R++ GCNIEN+     +CAER+A+
Sbjct: 13  ECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 71

Query: 522 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEF 632
            KAV +GY  F+ +AI +  Q +F +PCG CRQ + EF
Sbjct: 72  QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREF 109


>AJ000474-1|CAA04113.1|  146|Homo sapiens cytidine deaminase
           protein.
          Length = 146

 Score =  108 bits (260), Expect = 1e-23
 Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 521
           E VQ LL+ + + +K AYCPYS+F VGAA+LT+E  R++ GCNIEN+     +CAER+A+
Sbjct: 13  ECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 71

Query: 522 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEF 632
            KAV +GY  F+ +AI +  Q +F +PCG CRQ + EF
Sbjct: 72  QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREF 109


>AF061658-1|AAD15828.1|  146|Homo sapiens cytidine deaminase
           protein.
          Length = 146

 Score =  108 bits (260), Expect = 1e-23
 Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 521
           E VQ LL+ + + +K AYCPYS+F VGAA+LT+E  R++ GCNIEN+     +CAER+A+
Sbjct: 13  ECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 71

Query: 522 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEF 632
            KAV +GY  F+ +AI +  Q +F +PCG CRQ + EF
Sbjct: 72  QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREF 109


>S52873-1|AAB24946.1|  145|Homo sapiens cytidine deaminase protein.
          Length = 145

 Score =  107 bits (256), Expect = 4e-23
 Identities = 49/98 (50%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 521
           E VQ LL+ + + ++ AYCPYS+F VGAA+LT+E  R++ GCNIEN+     +CAER+A+
Sbjct: 12  ECVQQLLVCSQEAKQSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 70

Query: 522 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEF 632
            KAV +GY  F+ +AI +  Q +F +PCG CRQ + EF
Sbjct: 71  QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREF 108


>BC054036-1|AAH54036.1|  146|Homo sapiens cytidine deaminase
           protein.
          Length = 146

 Score =  107 bits (256), Expect = 4e-23
 Identities = 49/98 (50%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 521
           E VQ LL+ + + ++ AYCPYS+F VGAA+LT+E  R++ GCNIEN+     +CAER+A+
Sbjct: 13  ECVQQLLVCSQEAKQSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 71

Query: 522 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEF 632
            KAV +GY  F+ +AI +  Q +F +PCG CRQ + EF
Sbjct: 72  QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREF 109


>AF095644-1|AAC69599.1|   51|Homo sapiens cytidine deaminase
           protein.
          Length = 51

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEE 443
           E VQ LL+ + + +K AYCPYS+F VGAA+LT+E
Sbjct: 13  ECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQE 46


>AY634312-1|AAT47715.2|   82|Homo sapiens small cytidine deaminase
           protein.
          Length = 82

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = +3

Query: 342 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEE 443
           E VQ LL+ + + ++ AYCPYS+F VGAA+LT+E
Sbjct: 13  ECVQQLLVCSQEAKQSAYCPYSHFPVGAALLTQE 46


>S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein.
          Length = 1243

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 271  RAVPSAVSDQLITVKRSLIRYCFMIESPFCVVTYDDMQSSIGMQQ 137
            RAVPS+  D + T++ S  R  ++  SP   V+Y DM++ I  ++
Sbjct: 981  RAVPSSRGDYM-TMQMSCPRQSYVDTSPAAPVSYADMRTGIAAEE 1024


>S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrate-1
            protein.
          Length = 1242

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 271  RAVPSAVSDQLITVKRSLIRYCFMIESPFCVVTYDDMQSSIGMQQ 137
            RAVPS+  D + T++ S  R  ++  SP   V+Y DM++ I  ++
Sbjct: 980  RAVPSSRGDYM-TMQMSCPRQSYVDTSPAAPVSYADMRTGIAAEE 1023


>BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substrate 1
            protein.
          Length = 1242

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 271  RAVPSAVSDQLITVKRSLIRYCFMIESPFCVVTYDDMQSSIGMQQ 137
            RAVPS+  D + T++ S  R  ++  SP   V+Y DM++ I  ++
Sbjct: 980  RAVPSSRGDYM-TMQMSCPRQSYVDTSPAAPVSYADMRTGIAAEE 1023


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,063,883
Number of Sequences: 237096
Number of extensions: 1835757
Number of successful extensions: 4048
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4032
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)