Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29j03
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82266-15|CAD36491.1|  608|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z68213-9|CAD37352.1|  608|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL021571-5|CAA16513.2|  140|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF039049-11|AAB94246.1|  499|Caenorhabditis elegans Cytochrome p...    29   2.5  
Z71177-1|CAA94865.3|  355|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z96100-3|CAD60418.1|  893|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z96100-2|CAD60417.1|  912|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AY150817-1|AAN61051.1|  893|Caenorhabditis elegans ADR-1E protein.     29   4.4  
AY150816-1|AAN61050.1|  912|Caenorhabditis elegans ADR-1D protein.     29   4.4  
Z81466-3|CAB03867.1|  593|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U13876-2|AAM48539.1|  373|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U13876-1|AAM48538.1|  353|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>Z82266-15|CAD36491.1|  608|Caenorhabditis elegans Hypothetical
           protein C01F6.6b protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 345 ITFISFVFRTFVYYITNVESVLSLIPQ 265
           IT+IS+++ +FVYY+  + S L  +PQ
Sbjct: 17  ITWISYLYTSFVYYLWLISSHLPHLPQ 43


>Z68213-9|CAD37352.1|  608|Caenorhabditis elegans Hypothetical
           protein C01F6.6b protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 345 ITFISFVFRTFVYYITNVESVLSLIPQ 265
           IT+IS+++ +FVYY+  + S L  +PQ
Sbjct: 17  ITWISYLYTSFVYYLWLISSHLPHLPQ 43


>AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical
           protein T19A6.3b protein.
          Length = 142

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 440 ANSAILIEHFGAR*LNELAFILLDSFLCFITLLLLYRLFSEHLFIILPTL 291
           AN    IE F    ++      LD  LCF   LLL+ +F  H  I+ PT+
Sbjct: 60  ANELQKIEIFQIPMIDMFLTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTI 109


>Z78019-2|CAB01451.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK863.5 protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 378 FTRQFLVLHYIITFISFVFRTFVYYITNVESVLSL 274
           F     +LHY++ F+  VF T + ++T   S  S+
Sbjct: 2   FLLVIFILHYVLAFLGIVFNTILIFLTLFRSPKSI 36


>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
           protein F43D9.1 protein.
          Length = 1226

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 377 LLDSFLCFITLLLLYRLFSEHLFIILP 297
           +L + LCF T  +L  L  EHL+I LP
Sbjct: 216 ILVALLCFATAFILPTLHKEHLYIDLP 242


>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
           protein F43D9.1 protein.
          Length = 1226

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 377 LLDSFLCFITLLLLYRLFSEHLFIILP 297
           +L + LCF T  +L  L  EHL+I LP
Sbjct: 216 ILVALLCFATAFILPTLHKEHLYIDLP 242


>U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical
           protein T05B11.4 protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = -3

Query: 389 LAFILLDSFLCFITLLLLYRLFSEHLFIILPTLKVF*V*YLKSVGFSCLHLIPCKT 222
           L F  +D+FL   +L+ + R++   L IIL  L VF +   K   F    + PC T
Sbjct: 4   LIFFQIDNFLKICSLVEMQRIYQFILIIILLLLLVFDIFTNKPELFPSSRISPCYT 59


>AL021571-5|CAA16513.2|  140|Caenorhabditis elegans Hypothetical
           protein T19A6.3a protein.
          Length = 140

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 374 LDSFLCFITLLLLYRLFSEHLFIILPTL 291
           LD  LCF   LLL+ +F  H  I+ PT+
Sbjct: 80  LDFTLCFFVGLLLFAVFGVHRRIVAPTI 107


>AF039049-11|AAB94246.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 35B2 protein.
          Length = 499

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
 Frame = +1

Query: 274 QTQNTFN--VGNIINKCSENKRYKSNNVMKHKKLSSKMKASSFSYRAPKCSMRIAELAIP 447
           QT + F+  VG+IIN     KR+ ++N  +  KL   M ++S  +     +  +  L I 
Sbjct: 169 QTSDFFDLAVGSIINNTLIGKRFNAHNKDEFMKLKKMMDSASDLFTIFDLTAPVWMLKIL 228

Query: 448 AKRRC---LETWRENYDKLSIFAVERLRKYVMDEYPI 549
             +RC   L    E  + +S  A ER  +    EY +
Sbjct: 229 VPKRCERILGVQEEILNFVSREANERYEQLKSGEYTV 265


>Z71177-1|CAA94865.3|  355|Caenorhabditis elegans Hypothetical
           protein AC3.1 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 21/86 (24%), Positives = 40/86 (46%)
 Frame = -1

Query: 670 NFVLFSENF**VLFYCSAFYGKTSSTNWRA*NYESHLGYALLDTRPSHISLNVPPQKWTA 491
           N+V+F  N   ++F+   F+G T +         ++  + +LD    HIS +   +    
Sbjct: 194 NYVVFDSNIWAIVFFAFIFFGCTYTLVLIV--TTTYQMFKILDDNRKHISASNYAKHRAT 251

Query: 490 CRNFLSKFQDIVV*LESPIQLFSLSI 413
            R+ L++F    + +  P  LFSL +
Sbjct: 252 LRSLLAQFTTCFL-IVGPASLFSLLV 276


>Z96100-3|CAD60418.1|  893|Caenorhabditis elegans Hypothetical
           protein H15N14.1e protein.
          Length = 893

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
 Frame = +1

Query: 106 SYRMAHDVDYNFGDSYNTENTYIDN---HWTNGYAASSIDTHVLQGI--KCRQEKPTDLR 270
           +Y   +   Y  G  + +++T   N    W+   +A+S+ TH       + +Q++    +
Sbjct: 6   NYNFGYGQAYGSGTDHTSDSTNNYNWASQWSQPESAASLATHTFPQYVSQQQQQQQQQAQ 65

Query: 271 YQTQNTFNVGNIINKCSENKRYKSNNVMKHKKLSSKMKASSFSYRAPKCSMRIAEL 438
            Q QNT+   N I+   + ++       K  K         F       +M + EL
Sbjct: 66  QQAQNTYAAMNPISTFMQQQQRAQTFPQKQNKPKGPAAPKKFDSTGKSPAMLLHEL 121


>Z96100-2|CAD60417.1|  912|Caenorhabditis elegans Hypothetical
           protein H15N14.1d protein.
          Length = 912

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
 Frame = +1

Query: 106 SYRMAHDVDYNFGDSYNTENTYIDN---HWTNGYAASSIDTHVLQGI--KCRQEKPTDLR 270
           +Y   +   Y  G  + +++T   N    W+   +A+S+ TH       + +Q++    +
Sbjct: 6   NYNFGYGQAYGSGTDHTSDSTNNYNWASQWSQPESAASLATHTFPQYVSQQQQQQQQQAQ 65

Query: 271 YQTQNTFNVGNIINKCSENKRYKSNNVMKHKKLSSKMKASSFSYRAPKCSMRIAEL 438
            Q QNT+   N I+   + ++       K  K         F       +M + EL
Sbjct: 66  QQAQNTYAAMNPISTFMQQQQRAQTFPQKQNKPKGPAAPKKFDSTGKSPAMLLHEL 121


>AY150817-1|AAN61051.1|  893|Caenorhabditis elegans ADR-1E protein.
          Length = 893

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
 Frame = +1

Query: 106 SYRMAHDVDYNFGDSYNTENTYIDN---HWTNGYAASSIDTHVLQGI--KCRQEKPTDLR 270
           +Y   +   Y  G  + +++T   N    W+   +A+S+ TH       + +Q++    +
Sbjct: 6   NYNFGYGQAYGSGTDHTSDSTNNYNWASQWSQPESAASLATHTFPQYVSQQQQQQQQQAQ 65

Query: 271 YQTQNTFNVGNIINKCSENKRYKSNNVMKHKKLSSKMKASSFSYRAPKCSMRIAEL 438
            Q QNT+   N I+   + ++       K  K         F       +M + EL
Sbjct: 66  QQAQNTYAAMNPISTFMQQQQRAQTFPQKQNKPKGPAAPKKFDSTGKSPAMLLHEL 121


>AY150816-1|AAN61050.1|  912|Caenorhabditis elegans ADR-1D protein.
          Length = 912

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
 Frame = +1

Query: 106 SYRMAHDVDYNFGDSYNTENTYIDN---HWTNGYAASSIDTHVLQGI--KCRQEKPTDLR 270
           +Y   +   Y  G  + +++T   N    W+   +A+S+ TH       + +Q++    +
Sbjct: 6   NYNFGYGQAYGSGTDHTSDSTNNYNWASQWSQPESAASLATHTFPQYVSQQQQQQQQQAQ 65

Query: 271 YQTQNTFNVGNIINKCSENKRYKSNNVMKHKKLSSKMKASSFSYRAPKCSMRIAEL 438
            Q QNT+   N I+   + ++       K  K         F       +M + EL
Sbjct: 66  QQAQNTYAAMNPISTFMQQQQRAQTFPQKQNKPKGPAAPKKFDSTGKSPAMLLHEL 121


>Z81466-3|CAB03867.1|  593|Caenorhabditis elegans Hypothetical
           protein C09H6.3 protein.
          Length = 593

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 199 HTHWSSGCQCMYFQYYKNRRNY 134
           H H+  G QC YF+ ++N  N+
Sbjct: 366 HIHYILGLQCCYFRQHENAENH 387


>U13876-2|AAM48539.1|  373|Caenorhabditis elegans Hypothetical
           protein F57B9.7b protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 274 QTQNTFNVGNIINKCSENKRYKSNNVMKHKKL 369
           + +NT   GN+I    + KRYKSN  +  K+L
Sbjct: 295 ERENTNQQGNVIRMEGQMKRYKSNADVAEKEL 326


>U13876-1|AAM48538.1|  353|Caenorhabditis elegans Hypothetical
           protein F57B9.7a protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 274 QTQNTFNVGNIINKCSENKRYKSNNVMKHKKL 369
           + +NT   GN+I    + KRYKSN  +  K+L
Sbjct: 275 ERENTNQQGNVIRMEGQMKRYKSNADVAEKEL 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,118,566
Number of Sequences: 27780
Number of extensions: 346597
Number of successful extensions: 1106
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)